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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6oafA_

Fold library idPDB HeaderMoleculeTitle
c6oafA_2.20PDB header: viral proteinChain: A: PDB Molecule: polymerase cofactor vp35,nucleoprotein;


Added to library: Sat Aug 10 08:20:23 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDRTYRHHGPEVSGWFSEQLMTGKIPLTEVFVDPITIISGIVRQRVIPVYVVNDLEGICQHIIQAFEAGV
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Known secondary structure (DSSP)






TT
TTSS
GGGT





TTT





S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DFQDNADSFLLLLCLHHAYQGDHRLFLKSDAVQYLEGHGFRFEVREKENVHRLDELLPNVTGGKNLRRTL
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Known secondary structure (DSSP)

SS
TSTT
TSTT
S

SSGGGGS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTSWQSVGHMMVIFRLM
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Known secondary structure (DSSP) S
S



S

TTSTTTTT
TTS



GGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RTNFLIKFLLIHQGMHMVAGHDANDTVISNSVAQARFSGLLIVKTVLDHILQKTDLGVRLHPLARTAKVK
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Known secondary structure (DSSP)


S


TTTTTTSS

GGGGSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NEVSSFKAALGSLAKHGEYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLR
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Known secondary structure (DSSP) TTGGGGGGTTTTT
TTGGGG
GGG
TT


TT



GGG
 .........360..
Sequence EAATEAEKQLQQ
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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