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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6o7xa_

Fold library idPDB HeaderMoleculeTitle
c6o7xa_8.70PDB header: membrane proteinChain: A: PDB Molecule: vacuolar atp synthase catalytic subunit a;


Added to library: Sat Apr 6 09:21:27 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQLYIPLEVIREVTFLLGKMLRRFDEVERMVGFLNEVVEKHLSLENVNDMVKEITDCESRARQLDESLDS
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Known secondary structure (DSSP)
SSS




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LRSKLNDLLEQRQVIFECSKFIEVYMITGSIRRTKVDILNRILWRLLRGNLIFQNFPIEVEKDCFIIFTH
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Known secondary structure (DSSP)



GGGTTS











 .........150.........160.........170.........180.........190.........200.........210
Sequence GETLLKKVKRVIDSLNGKIVSLNTRSSELVDTLNRQIDDLQRILDTTEQTLHTELLVIHDQLPVWSAMTK
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Known secondary structure (DSSP) SSSSTTTT



SS
TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence REKYVYTTLNKFQQESQGLIAEGWVPSTELIHLQDSLKDYIETLGSEYSTVFNVAGLATVVTFPFMFAIM
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Known secondary structure (DSSP) TTS


SS



GGGT







B

TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FGDMGHGFILFLMALFLVLNERKFGAMHRDEIFDMAFTGRYVLLLMGAFSVYTGLLYNDIFSKSMTIFKS
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Known secondary structure (DSSP) S

TSS


TTT
SSS




S

 .........360.........370.........380.........390.........400.........410.........420
Sequence GWQWPSTFRKGESIEAKKTGVYPFGLDFAWHGTDNGLLFSNSYKMKLSILMGYAHMTYSFMFSYINYRAK
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Known secondary structure (DSSP) S

SS

TT





S

SSSS
GGGTT
SSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NSKVDIIGNFIPGLVFMQSIFGYLSWAIVYKWSKDWIKDDKPAPGLLNMLINMFLAPGTIDDQLYSGQAK
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Known secondary structure (DSSP) T
TTTS
SSSS





SSTT

SS

STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LQVVLLLAALVCVPWLLLYKPLTLRRLNKFNFGDVMIHQVIHTIEFCLNCISHTASYLRLWALSLAHAQL
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Known secondary structure (DSSP) TSGGG


TTTT
 .........570.........580.........590.........600.........610.........620.....
Sequence SSVLWDMTISNAFSSKNSGSPLAVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRLHWVEAMSK
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Known secondary structure (DSSP) TSSS

SSSTT





TTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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