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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6o6jA_

Fold library idPDB HeaderMoleculeTitle
c6o6jA_1.60PDB header: transport proteinChain: A: PDB Molecule: ion channel castor;


Added to library: Sat Sep 14 08:30:43 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QNHTLILGWSDKLGSLLNQLAIANESLGGGTIAVMAERDKEDMELDIGKMEFDFKGTSVICRSGSPLILA
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Known secondary structure (DSSP)





TTGGGT

SS
T

S

TT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLKKVSVSKARTIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVEMSDLDNEVLVKLVGGDLVET
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Known secondary structure (DSSP) TTGGG
S


SS
T
TT

SSS
GGGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMLFEDVLISFPAAIPCGIKVASYGG
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Known secondary structure (DSSP) STTSSSS


GGGTT
BTTS
TTGGGTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KIILNPDDSYVLQEGDEVLVIAEDDDTYAPAPLPMVRRGSLPKDFVYPKSPERILFCGWRRDMEDMITVL
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Known secondary structure (DSSP) S

TT
B

TT
SSTTS



S








S









S

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DASLAPDSELWMFNDVPEKEREKKLIDGGLDISRLENISLVNREGNAVIRRHLESLPLESFDSILILADE
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Known secondary structure (DSSP) S
TTSS
GGGTT

GGG
SS

TT
TS
GGG
S


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SVEDSAIQADSRSLATLLLIRDIQARRLPTVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAED
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Known secondary structure (DSSP) TTTTST


S
TTTSGGGGGT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RQINDVLEELFAEEGNEMHIRQADIYLREGEEMSFYEIMLRARQRREILIGYRLANAERAVINPPAKTGR
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Known secondary structure (DSSP) TTSSSSGGGT

TT
TTT
TT
SS
S
S

SS
 .........500.....
Sequence RKWSLKDVFVVITEK
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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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