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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6o3cA_

Fold library idPDB HeaderMoleculeTitle
c6o3cA_2.80PDB header: signaling proteinChain: A: PDB Molecule: smoothened homolog;


Added to library: Sat Jul 6 09:38:05 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSHCGRAAHCEPLRYNVCLGSALPYGATTTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAVIQPLLCAVY
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Known secondary structure (DSSP)

TT



S
STT
S


SSS
TT
SSGGGGSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence MPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNEVQNIKFNSSGQCEAPLVRT
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Known secondary structure (DSSP) S

B
SS


TTTTTTT


GGGS

TTTS
SS


GGGGS








TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYV
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Known secondary structure (DSSP)
SGGG
BTTBTTBSS
TTS
T

 .........220.........230.........240.........250.........260.........270.........280
Sequence NACFFVGSIGWLAQFMDGARREIVCRADGTMRFGEPTSSETLSCVIIFVIVYYALMAGVVWFVVLTYAWH
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Known secondary structure (DSSP) GGGSTTB
TTSBB

SBS
SSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TSFKALGTTYQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGL
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Known secondary structure (DSSP) TTTS


TTTT
TTT

TTT
SSSSSTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEW
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Known secondary structure (DSSP) SSSSS
T
 .........430.........440.........450.........460.........470.........480....
Sequence ERSFRDYVLCQANVTIGDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRL
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Known secondary structure (DSSP) S





S



GGG
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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