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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6o38A_

Fold library idPDB HeaderMoleculeTitle
c6o38A_2.60PDB header: sugar binding proteinChain: A: PDB Molecule: acinetobacter secreted protease cpaa;


Added to library: Sat Jul 27 08:24:40 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATVLSPNQNNNSGSIPTGYSDLEFSLANGNWVKNLSLPTNANNSDKITIRSSAAYSSYLDTSNTNIPLEV
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Known secondary structure (DSSP)

GGGTTT

B

S

S
SSS

S

SS

TT


SS

TTBS
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKINSGDVYQFIFNSSQNKWIAQLATVSPTTGSNYELIPLTTATXQKVLIQDDKWAQTIALPSDVRDGTT
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Known secondary structure (DSSP)
TT
TTTT






SS



S
S
SSS

S

SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQVVSTASVSSDIDKTNLLFPSSFTLKNGSEYWFKYYSALGKWVPEYIKPQKLNVQQIGTSLAAVNSPLT
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Known secondary structure (DSSP)

SS


TTBSS




TT
TTTT

TTB




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EIAFGDGNWVSNFTLPTTANDRDRIIIKSTATWSAKINNTNVNSQATLTLKTGDQYEFXYVSDKGYWQLI
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Known secondary structure (DSSP) BTTB

SB

S

STT


SS


TTBS

S


TT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SSPTKVIDSTATIPAILPNXTQPTLKVKLSTSNWQPTLQLPAQAQVGDKVVIVSNASADTYINAANGLST
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Known secondary structure (DSSP)


TTS


SB



SSS
STT

S

SS

TT

SSS

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AIKNGENRRFIYTAQGWTVDSYTIDXLLVSSPEVNSILGESAAKLRXIEGVNLTNLTAENSNARFYLRDV
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Known secondary structure (DSSP)
TT
TT



TT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence GYITYKIPAATLKEAISTGRDDTTVQNERKRILADGVYYQGNEPGDGGCGWAWINASAYNXIGANDIAGC
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Known secondary structure (DSSP)


S
SSTTT
TT
S
S

SSSS
TT

TTT
SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SFAAXRHEVGHNLGLYHNGSTNIGSGFAHPLGSTAXGGNNINFYSSPYLYNPKYGVRLGEEGKIDAVSVI
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Known secondary structure (DSSP)
GGGT
B
TT
SSSSB



TT


GGGT

SS



TT
B
TTT

BSSBTTTB
 .........570...
Sequence NLNAQKISLYNHH
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Known secondary structure (DSSP) TSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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