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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nyyC_

Fold library idPDB HeaderMoleculeTitle
c6nyyC_3.00PDB header: translocaseChain: C: PDB Molecule: afg3-like protein 2;


Added to library: Sat May 25 08:59:06 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLA
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Known secondary structure (DSSP)

TT





S




GGG

S

TTTT




SSSSSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDQIDAVGRKRGRGNFGGQSEQE
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Known secondary structure (DSSP)

S
TTSS

SSSSTTSTT
SGGGT
B


SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDS
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Known secondary structure (DSSP) SSTT

SS

S

TTB
TTTSSTTT
S




STTS
B
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEK
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Known secondary structure (DSSP) S

S
TT

TTTTTT
SSB
TS

B
SS



TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KTVAYHQAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIF
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Known secondary structure (DSSP) STTS

B


B
S
BTTBS
B

B




S


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence FGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDA
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Known secondary structure (DSSP) TS


STT




S


TTT
S






SSS




SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence YKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKD
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Known secondary structure (DSSP) TTTTTSSB


S
SS



SSTTTSTTTS

S





GGG

 .
Sequence W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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