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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ny5A_

Fold library idPDB HeaderMoleculeTitle
c6ny5A_3.00PDB header: rna binding protein/rnaChain: A: PDB Molecule: pumilio domain-containing protein c56f2.08c;


Added to library: Sat Jul 6 08:54:43 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEFELRRQACGRSQLLKSRVDILEVARQFEMRINLDIVDSMIASAIENNKVATEILPPVETLRSRQFEAS
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Known secondary structure (DSSP)
TT
S
TTT
TT






SS









 .........80.........90.........100.........110.........120.........130.........140
Sequence KLREIRKNIDSGFYTQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIG
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Known secondary structure (DSSP) TT
S
TTTTTTSTTS
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IHKNGTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYPKNTFLFEVMARHCCE
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Known secondary structure (DSSP) TSTTT

SGGGSTTGGGG
TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IGQSRFGARAIRACLENENATFEQQALVVASIIINSHLLATNSNGMLLLTWLLDNSFFRNRHRLLAIHLA
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Known secondary structure (DSSP) TSSTT

TTTTSTT

STTG
 .........290.........300.........310.........320.........330.........340.........350
Sequence THLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLFFSEKDNVLTYILQDQAVGPSFIHKVITYPSIGR
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Known secondary structure (DSSP) GGTTSTT
TT
S
GGG
SSSSSTTS
S
 .........360.........370.........380......
Sequence EFLAQFHLVIKRVLINIHAQPNAVYCRLMEEVGMTS
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Known secondary structure (DSSP) T

SSTTTTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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