Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ntwA_

Fold library idPDB HeaderMoleculeTitle
c6ntwA_2.76PDB header: transferase/transferase inhibitorChain: A: PDB Molecule: probable l,d-transpeptidase ycbb;


Added to library: Sat Mar 23 08:27:29 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PGDSPVAVSEQGEALPQARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVAIA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)



TTS






TGGGGS
TT


TTTTT

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence GFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQL
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
SSTT
TT

STT
SS







 .........150.........160.........170.........180.........190.........200.........210
Sequence ALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLD
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT
TTS


TT

S






SS
B
TT


SSTTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence AAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAY
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)



TS

SS
B


GGGS
SS

SGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYTV
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT
SSS





S



TTT
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence MRGWSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALS
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP) S





B
GGGS
GGG
BTTB



SSTTSSS
S

SSSS



S
GGGGG
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYN
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) SS
TTSSS





SS



S
TTSS


TT
 .........500.....
Sequence YDLPQIVSKAEQLIR
Predicted secondary structure



SS confidence














Known secondary structure (DSSP)







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D