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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nr3C_

Fold library idPDB HeaderMoleculeTitle
c6nr3C_3.40PDB header: transport proteinChain: C: PDB Molecule: transient receptor potential cation channel subfamily m


Added to library: Sat Feb 23 08:34:30 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXKYIRLSCDTDSETLYDLMTQHWHLKTPNLVISVTKNFALKPRMRKIFS
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TT










B





S

TT



S







TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLIYIAQSKGAWIFTGGTHYGLMKYIGEVVRDNTISRSSEENVVAIKRDPLYCLDNNHTHLLLVTIEAKV
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Known secondary structure (DSSP) T




BSSSSS







S

S
B
TT
S


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTQLEKYISERVIPESNYGGKIPIVCFAQGGGKETLKSINVAIKSKIPCVVVEGSGRIADVIASLVSSCV
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Known secondary structure (DSSP) T


SS
TTSSS

SS

TT

TTS
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence KESLLRFLPRTISRLSEEETESWIKWIKEVLESPHLLTVIKIEEAGDEIVSNAISFALYKAFSTNEHDRD
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Known secondary structure (DSSP)


TT
TTT
SSS

TTST
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NWNGQLKLLLEWNQLDLASDEIFTNDRNWESADLQDVMFTALVKDRPKFVRLFLENGLNLRKFLTTEVLR
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Known secondary structure (DSSP)
TT
TS
SSS


TT





 .........360.........370.........380.........390.........400.........410.........420
Sequence ELYTNNFSSLVFKNLQIAKNSYNDALLTFVWKMVEDFRRPITRHPLQALFIWSVLQNKKELSKVIWEQTR
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Known secondary structure (DSSP) S
S





S
TT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GCTLAALGASKLLKSMAKVKNDINAAGESEELANEYETRAVELFTECYSNDEDLAEQLLTYSCEAWGGSN
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Known secondary structure (DSSP) ST

S

T
TTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence CLELAVEARDQQFIAQPGVQNFLSKQWYGEISRDTKNWKIILCLFFFPLIGCGFISFRKKKLFLYYVSFF
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Known secondary structure (DSSP) T
SSSTTB
SSS
SSTTSS
B


 .........570.........580.........590.........600.........610.........620.........630
Sequence TSPFVVFSWNVIFYIAFLLLFAYVLLMDFQKEPTALEIILYVLVFILLCDEVRQWYMNGSKYFSDLWNVM
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Known secondary structure (DSSP) T
TTTT
SSS


SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence DTLGIFYFIAGIVFRLHSWYSGRVIFCLDYIVFTLRLIHIFTVSRNLGPKIIMLQRMMIDVFFFLFLFAV
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Known secondary structure (DSSP)

GGGGGGGGGSTTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence WMVAFGVARQGILRWEWIFRSVIYEPYLAMFGEWITIPLVCIYMLSTNILLVNLLVAMFGNNDQVWKFQR
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Known secondary structure (DSSP)



GGG


 .........780.........790.........800.........810.........820.........830.........840
Sequence FFLVQEYCSRLTIPFPFVIFAYIFMVMRKPSVCCSRNEDNEILAWEAVMKENYLVKINTKXXXXXXXXXX
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Known secondary structure (DSSP) S
SS
GGG




SS
S

 .........850....
Sequence XXXXXXXXXXXXXX
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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