PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6nqyB_

Fold library id	PDB Header	Molecule	Title
c6nqyB_	2.50	PDB header: protein fibril	Chain: B: PDB Molecule: flagellar coiling protein a;

Links to external resources
Added to library: Sat Feb 1 08:29:10 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E I M E Q E S L W K N P D F K G Y N K T F Q E L H Q L S K T F A N N Q F R L A L S N Y Q S G V N T I M K N R D W V E Q Y R K E E A E K K R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D E K W Y W Q K V D R K A R E E R V V Y R E K M K A K Q D A L N Y F S K A I N H L D E I K N P D L R E R P E F K R L L S D V Y R S W I M A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T
T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y D L Q N L P Q T I P I L E L Y I E I D D N E K E Y P A H K Y L A S A Y S F E E N M I K K T K G P D D M L F K Y R Y K K N V H L L R A T E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T G G G
T T

. . . . . . . . . 220 . . . . . . .

Sequence K Y G K D S P E Y K H I V N V I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	I	M	E	Q	E	S	L	W	K	N	P	D	F	K	G	Y	N	K	T	F	Q	E	L	H	Q	L	S	K	T	F	A	N	N	Q	F	R	L	A	L	S	N	Y	Q	S	G	V	N	T	I	M	K	N	R	D	W	V	E	Q	Y	R	K	E	E	A	E	K	K	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S																					T																																						T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	E	K	W	Y	W	Q	K	V	D	R	K	A	R	E	E	R	V	V	Y	R	E	K	M	K	A	K	Q	D	A	L	N	Y	F	S	K	A	I	N	H	L	D	E	I	K	N	P	D	L	R	E	R	P	E	F	K	R	L	L	S	D	V	Y	R	S	W	I	M	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S																																							T								T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	D	L	Q	N	L	P	Q	T	I	P	I	L	E	L	Y	I	E	I	D	D	N	E	K	E	Y	P	A	H	K	Y	L	A	S	A	Y	S	F	E	E	N	M	I	K	K	T	K	G	P	D	D	M	L	F	K	Y	R	Y	K	K	N	V	H	L	L	R	A	T	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T															S	T	T	G	G	G																						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Sequence	K	Y	G	K	D	S	P	E	Y	K	H	I	V	N	V	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S