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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6notB_

Fold library idPDB HeaderMoleculeTitle
c6notB_2.40PDB header: translationChain: B: PDB Molecule: elongation factor g;


Added to library: Sat Feb 2 08:44:48 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHMSKINKLEQIRNIGICAHIDTTTERILYYTGKTSAATTCRWQDKVINIIDTPGHVDFTIEVERSLRVL
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Known secondary structure (DSSP)




TT
GGG







STT




SB


 .........80.........90.........100.........110.........120.........130.........140
Sequence DGAVAVFDGVAGVEPQSETVWRQADKYNVPRMCFVNKMDRMGADFYRCVEMIKDRLGARSLIIQLPIGIE
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Known secondary structure (DSSP) STTTBS
TTT


TTSTT

TS



S
G
 .........150.........160.........170.........180.........190.........200.........210
Sequence ENFKGIVNLIKMKAVIWKDEYFEEDIPADMQDKAAEYRARLLDMVVELDDTIMEQYLSGAEITEEQIKIL
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Known secondary structure (DSSP) GG

TTT







TT
TTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence IRKGTIEARFYPILCGSAFKNKGVQPLLDAIVDFLPSPIDIGIVKGIEVSTSEEKDFPISIVEPFSALAF
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Known secondary structure (DSSP) TTS

BTTTTBSS


TTTT
BSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence KIMNDPFVGSLTFIRIYSGKITSGATVINTVKNKREKIGRMLLMHANNREDIKEASAGDIVALAGLKDTS
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Known secondary structure (DSSP) TTTSTT
TTTT



SS
STT


SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence TGDTLSDIDKQVVLERMEFPEPVIELAVEPKSTADQEKMGLALSRLAAEDPSFRVSTDHETGQTVIKGMG
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Known secondary structure (DSSP) TT

SSS






S

SSGGGGT
TT

TTT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ELHLEIIIDRMRREFKVEANIGAPQVAYRETITTACEIDYTHKQFARVKIIFEPLKDVIDLTFVFESKIY
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Known secondary structure (DSSP)







SS



GGG







 .........500.........510.........520.........530.........540.........550.........560
Sequence IPGVEKGLNNIRETGVIAGYPMIDFKATLVLAFEIAAKGAFREGMQKGNPKLLEPIMKVEVITPDEYMGD
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Known secondary structure (DSSP) TTS
TTTS

B
S

TGGG
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence IIGDLNSRRGQIQNMDPRGNAQVVTAHVPLAEMFGYVNTLRSLSQGRAQFSMIFSHYDQVPSQVADMIKA
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Known secondary structure (DSSP) TT
TTGGG
TTTTT



TT
 .
Sequence K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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