PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6no2B_

Fold library id	PDB Header	Molecule	Title
c6no2B_	2.16	PDB header: ligase	Chain: B: PDB Molecule: succinate--coa ligase [adp-forming] subunit beta;

Links to external resources
Added to library: Sat Jul 20 08:21:13 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N I H E W Q S K Q L I Q K Y G G R A Q S G E V A F S P E R S R D I A K K L W N Q F P G C K F V V K A Q V L A G G R G K G H W E H G M Q G G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
B
S S S T T
S
S
G G G
B B T T B
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L A K T P E E V Y E I A N E M I G H K L I T K Q T G A K G I N C N K V M V C G A V D I L K E F Y L S I L L D R A M G C P V I I A T S Q I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T B
T T T T T S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E V A Q K C P E C L F K V P I S V K N G P T N E Q L V K L A K D L G L E G D L V Q D C V D N V K A L Y Q V F D K C D S T M V E I N P L G V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T T T
T T
T T T
S

. . . . . . . . . 220 . . . . . . . .

Sequence E T P T D E K V I C C L D A K I A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	I	H	E	W	Q	S	K	Q	L	I	Q	K	Y	G	G	R	A	Q	S	G	E	V	A	F	S	P	E	R	S	R	D	I	A	K	K	L	W	N	Q	F	P	G	C	K	F	V	V	K	A	Q	V	L	A	G	G	R	G	K	G	H	W	E	H	G	M	Q	G	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B												T	T			B							S	S															S	T	T										S		S		G	G	G		B	B	T	T	B				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	A	K	T	P	E	E	V	Y	E	I	A	N	E	M	I	G	H	K	L	I	T	K	Q	T	G	A	K	G	I	N	C	N	K	V	M	V	C	G	A	V	D	I	L	K	E	F	Y	L	S	I	L	L	D	R	A	M	G	C	P	V	I	I	A	T	S	Q	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S												T	T				B		T	T	T	T	T	S																											T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	V	A	Q	K	C	P	E	C	L	F	K	V	P	I	S	V	K	N	G	P	T	N	E	Q	L	V	K	L	A	K	D	L	G	L	E	G	D	L	V	Q	D	C	V	D	N	V	K	A	L	Y	Q	V	F	D	K	C	D	S	T	M	V	E	I	N	P	L	G	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	S							T	T	T														T	T			T																				T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	E	T	P	T	D	E	K	V	I	C	C	L	D	A	K	I	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S							S