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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nmiE_

Fold library idPDB HeaderMoleculeTitle
c6nmiE_3.70PDB header: transcriptionChain: E: PDB Molecule: general transcription factor iih subunit 2, p44;


Added to library: Sat Mar 16 08:36:47 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTL
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Known secondary structure (DSSP)

GGGG


SSSSST









S
B

S
B
SSGGG

SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQT
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Known secondary structure (DSSP)
SS
BTTS
TT



S


 .........150.........160.........170.........180.........190.........200.........210
Sequence LKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDE
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Known secondary structure (DSSP) TTSS
TTS



S



SS
TTTT
SSS

S



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIXXXXXXXXXXXXXXXXXXXXXGGYFCPQCRAKYCEL
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Known secondary structure (DSSP) TTS

B

SSS









STTTTTT


B







B
S

TTT


BSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVCAVCQNVFCVDC
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Known secondary structure (DSSP) S
B
TTT



SSTTGGG
TTTS





S
TT



B
TTTS
B

SS

SSS


 .........360......
Sequence DVFVHDSLHCCPGCIH
Predicted secondary structure









SS confidence















Known secondary structure (DSSP) TT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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