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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nmiD_

Fold library idPDB HeaderMoleculeTitle
c6nmiD_3.70PDB header: transcriptionChain: D: PDB Molecule: general transcription factor iih subunit 4, p52;


Added to library: Sat Mar 16 08:37:31 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RGLNRVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVK
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Known secondary structure (DSSP)

S







TTTTS
TSSTTS
TS

S
B
TSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWSDDTSQLGPDKHARDVP
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Known secondary structure (DSSP) GGGSTTTTTS
SSS

S

SS
TT


SS

S
TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence SLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLSQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFM
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Known secondary structure (DSSP) T
S




SSTTSS
B
SSSS
B


TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRL
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Known secondary structure (DSSP) TTTTSSS

TT

SSS



SS

TSS
TT
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence AINLSSGVSGAGGTVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIA
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Known secondary structure (DSSP) T

SS


SS

SSS


TTT



S
SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence SGITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHAR
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Known secondary structure (DSSP) S


TTTB
TTT
S
SSSS










S
S
 .........430.........440.........450..
Sequence ELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQ
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Known secondary structure (DSSP) TT


SSS

STTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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