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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nk6B_

Fold library idPDB HeaderMoleculeTitle
c6nk6B_4.06PDB header: virus like particle/signaling proteinChain: B: PDB Molecule: e1 glycoprotein;


Added to library: Sat May 25 08:22:35 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YEHVTVIPNTVGVPYKTLVNRPGYSPMVLEMELQSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKD
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Known secondary structure (DSSP)
S
TT



TTB










TTS





 .........80.........90.........100.........110.........120.........130.........140
Sequence KSLPDYSCKVFTGVYPFMWGGAYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGN
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Known secondary structure (DSSP)


TT
S


TTS
SSSSS

GGGGTS



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NITVAAYANGDHAVTVKDAKFVVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPES
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Known secondary structure (DSSP) TTS


TT


S



S

STT




TT


TTSTTSSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAVNCAVGNIPISI
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Known secondary structure (DSSP) S






B



TT




B




TTTTTTTS




GGG
TTTT



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DIPDAAFTRVVDAPSVTDMSCEVPACTHSSDFGGVAIIKYTASKKGKCAVHSMTNAVTIREADVEVEGNS
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Known secondary structure (DSSP)

TTS

BTTTS

B
SSS

SS


BSSTTS


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QLQISFSTALASAEFRVQVCSTQVHCAAACHPPKDHIVNYPASHTTLGVQDISTTAMSWVQKITGGVGLI
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Known secondary structure (DSSP) SSSTT
B

S
S

SS

S




SS


STT

S
 .........430.........
Sequence VAVAALILIVVLCVSFSRH
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Known secondary structure (DSSP) TTT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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