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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nd1A_

Fold library idPDB HeaderMoleculeTitle
c6nd1A_4.10PDB header: protein transportChain: A: PDB Molecule: protein translocation protein sec63;


Added to library: Sat Jan 12 08:15:04 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYDEASETWPSFILTGMTLLQIYQEFNEEVFKNLNEEYTSDEIKQFRRKFKIWSRRNIIIIVGWILVAIL
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Known secondary structure (DSSP)





S
SS







SSTTT




 .........80.........90.........100.........110.........120.........130.........140
Sequence LQRINSSPLLVVCYVALLGLILPYFVSRWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHW
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Known secondary structure (DSSP) TT

TTTTTTS
TTS

T

TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LSFAHEFKQFFPDLQPTDFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAI
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Known secondary structure (DSSP) T
STTTTTSSS

TT


SSSTTTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NTFKCIVQAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLRVAS
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Known secondary structure (DSSP) TTT

S
TTTSSS






SSS
S



 .........290.........300.........310.........320.........330.........340.........350
Sequence HIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQDFESQRDPFAMMSK
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Known secondary structure (DSSP) S

B


SS
SS

SS




B
SS



TTTS
TTTTSS



GGGTS
GGGGGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence QPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNLNDDKDFFDEKFDINDWEIGTIKI
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Known secondary structure (DSSP) S



B


SSSSS

B

TTTT
S






GGG
TTT







TTS


 .........430.........440.........450.........460.
Sequence PLGQPAPETVGDFFFRVIVKSTDYFTTDLDITMNMKVRDSP
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Known secondary structure (DSSP)
SS


SS
SSSS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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