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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nabB_

Fold library idPDB HeaderMoleculeTitle
c6nabB_2.00PDB header: ligaseChain: B: PDB Molecule: prolyl-trna synthetase;


Added to library: Sat Feb 2 08:41:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGIDVKKQENFSEWYSQVITKSEFLDYYDVSGCYIFRPNCWFVWESVQKFFDAEIKKLGVQNVMFPLFVT
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Known secondary structure (DSSP)



S
TTT
TTS
SSTT

TT




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KRALETEKDHVEGFSPEVAWVTKSGNSDLQEPIALRPTSETIMYPSYAKWIQSHRDLPLKLNQWTNVVRW
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Known secondary structure (DSSP) TSSGGG

TT
SSS

BGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence EFKHAVPFIRSREFYWQEGHSAFKSKEEADEEVFTILELYKRVYEELLAVPVIKGTKTENEKFAGADYTT
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Known secondary structure (DSSP)
SS

BTTTB
SSSTS





TTTS
TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TVETFIATNGRAVQGGTSHHLGQNFSKMFKIQFEAENKETQFAYQNSWGLSTRTLGVMIMVHGDDKGMVL
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Known secondary structure (DSSP) TTTTTT

TTS

T
BTTB


 .........290.........300.........310.........320.........330.........340.........350
Sequence PPRVAFCQVVVIPLINATLVEKTKEIYNELEKAGIRVKLDDRLERTPGWKYNYWELRGVPLRIEVGPKDL
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Known secondary structure (DSSP)
GGG
S
S


TT




SSS
T
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence EKQQIMLCRRDTGEKWTMPLSEFSGDSIKAVLDKIHDSMLNKARKEMNERIVVTRTWPEFIKALNSGNMC
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Known secondary structure (DSSP) TTTTT

GGG
ST

STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LIPWHESKAAEEYIKEKSKLESVQSQSDANTGLTGAAKSLCVPLDQSSFPSLEGLENFYPEEAHKKPNCW
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Known secondary structure (DSSP)


T



TT

S

S

TT



TT


SSGGGTTS


 ........
Sequence ALFGRSYP
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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