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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6n9yA_

Fold library idPDB HeaderMoleculeTitle
c6n9yA_4.00PDB header: viral proteinChain: A: PDB Molecule: non-structural protein 1;


Added to library: Sat Mar 16 08:58:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVEL
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Known secondary structure (DSSP)
T

TTT




SSGGGB
SSSBTTTTTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLS
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Known secondary structure (DSSP) TTSS
S


S
STT

S


S

S


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGY
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Known secondary structure (DSSP)
GGGGS
SSSB


S
SS

TTS


TT
S
S
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLM
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Known secondary structure (DSSP)






STTTSTTTTSTTTSS

SSS
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPT
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Known secondary structure (DSSP)



SS

S
TS


SSGGGTSSTT
SSTT
SSSTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence CGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHR
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Known secondary structure (DSSP)
T
S
S
SS








SSTT

STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence WIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTIL
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Known secondary structure (DSSP) STT
SSS
GGGS


TTTT


TTS






 .........500.........510.........520.........530.........540.........550..
Sequence KGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQMRMEY
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Known secondary structure (DSSP) S




T






S




S
ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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