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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6n9nB_

Fold library idPDB HeaderMoleculeTitle
c6n9nB_3.30PDB header: immune systemChain: B: PDB Molecule: gasdermin-d;


Added to library: Sat Jun 8 08:14:21 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FEKVVKNVIKEVSGSRGDLIPVDSLRNSTSFRPYCLLNRKFSSSRFWKPRYSCVNLSIKDILEGSFKVSD
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Known secondary structure (DSSP)
S

SSS




STTTTTT
TT





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S

STTT




SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence VVDGNIQGRVMLSISGGAAVSDSSSASMNVCILRVTQKTWETMQHERHLQQPENKILQQLRSRGDDLFVV
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SS


SS

S





S


SS

TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TEVLQTKEEVQITEMVTIPAGSILAFRVAQLLIGSKWDILLVSDEKQRTFADFQGLYAEVKACSSELESL
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Known secondary structure (DSSP) SS




TT

SSS
SS

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GGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EMELRQQILVNIGKILQDQPSMEALEASLGQGLCSGGQVEPLDGPAGCILECLVLDSGELVPELAAPIFY
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Known secondary structure (DSSP)
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STTTB
SSS
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLGALAVLSETQQQLLAKALETTVLSKQLELVKHVLEQSTPWQEQSSVSLPTVLLGDCWDEKNPTWVLLE
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Known secondary structure (DSSP) TS
STTSSTTS
SSSS





SS

TTS
 .........360.........370.........380........
Sequence ECGLRLQVESPQVHWEPTSLIPTSALYASLFLLSSLGQ
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Known secondary structure (DSSP) TTT

SSSS


GGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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