PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6n9aB_

Fold library id	PDB Header	Molecule	Title
c6n9aB_	2.50	PDB header: biosynthetic protein	Chain: B: PDB Molecule: trna threonylcarbamoyladenosine biosynthesis protein tsab;

Links to external resources
Added to library: Sat May 25 08:26:29 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S H M A S N V L A L D T S Q R I R I G L R K G E D L F E I S Y T G E K K H A E I L P V V V K K L L D E L D L K V K D L D V V G V G I G P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S T T
S S S
T T
G G G
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G L T G L R V G I A T V V G L V S P Y D I P V A P L N S F E M T A K S C P A D G V V L V A R R A R K G Y H Y C A V Y L K D K G L N P L K E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T S S S
S T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S V V S D E E L E E I T K E F S P K I V L K D D L L I S P A V L V E E S E R L F R E K K T I H Y Y E I E P L Y L Q K S I A E L N W E K K K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
T T
B
T T
G G G G T S S S S

.

Sequence G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	H	M	A	S	N	V	L	A	L	D	T	S	Q	R	I	R	I	G	L	R	K	G	E	D	L	F	E	I	S	Y	T	G	E	K	K	H	A	E	I	L	P	V	V	V	K	K	L	L	D	E	L	D	L	K	V	K	D	L	D	V	V	G	V	G	I	G	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S								S	S	S								T	T									S	S	S																	T	T			G	G	G		S								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	L	T	G	L	R	V	G	I	A	T	V	V	G	L	V	S	P	Y	D	I	P	V	A	P	L	N	S	F	E	M	T	A	K	S	C	P	A	D	G	V	V	L	V	A	R	R	A	R	K	G	Y	H	Y	C	A	V	Y	L	K	D	K	G	L	N	P	L	K	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T	T															T	S	S	S											S	T	T										S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	V	S	D	E	E	L	E	E	I	T	K	E	F	S	P	K	I	V	L	K	D	D	L	L	I	S	P	A	V	L	V	E	E	S	E	R	L	F	R	E	K	K	T	I	H	Y	Y	E	I	E	P	L	Y	L	Q	K	S	I	A	E	L	N	W	E	K	K	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S			S					S	S																		T	T			B		T	T							G	G	G	G					T	S	S	S	S
	.
Sequence	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)