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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6n2fB_

Fold library idPDB HeaderMoleculeTitle
c6n2fB_2.27PDB header: lyaseChain: B: PDB Molecule: diaminopimelate decarboxylase 2, chloroplastic;


Added to library: Sat Apr 27 08:38:26 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FDHCFKKSSDGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKI
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Known secondary structure (DSSP)


S
TTS
TTSS
SS
TTTS
GGG


 .........80.........90.........100.........110.........120.........130.........140
Sequence LEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASR
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Known secondary structure (DSSP) TT
SSTT

GGG

SS

T

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISGKQVNVLLRINPDVDQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVD
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Known secondary structure (DSSP) TS
B







GGGB
SSTTSS
SB
STTT
TTT


BSSB

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence IFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGR
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Known secondary structure (DSSP) TT





B


SS
S





TTTTT


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCES
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Known secondary structure (DSSP) GGGTTS

TTT






SS


TTS


SS
ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFDDHLRFFEG
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Known secondary structure (DSSP) T




TT
SS
TTTTGGG


GGG





TTS




TGGGTT
 ..
Sequence LK
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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