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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mzbA_

Fold library idPDB HeaderMoleculeTitle
c6mzbA_3.40PDB header: signaling proteinChain: A: PDB Molecule: rod cgmp-specific 3',5'-cyclic phosphodiesterase subunit


Added to library: Sat Mar 9 08:34:02 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKFLDSNVSFAKQYYNLRYRAKVISDLLGPREAAVDFSNYHALNSVEESEIIFDLLRDFQDNLQAEKCVF
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Known secondary structure (DSSP)
TTTTSSS

STTT
TT






TTS



SSTSS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NVMKKLCFLLQADRMSLFMYRARNGIAELATRLFNVHKDAVLEECLVAPDSEIVFPLDMGVVGHVALSKK
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Known secondary structure (DSSP) TT

TT

S

SS

TTTS


GGG




SSSSTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IVNVPNTEEDEHFCDFVDTLTEYQTKNILASPIMNGKDVVAIIMVVNKVDGPHFTENDEEILLKYLNFAN
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Known secondary structure (DSSP)


GGGSSS


ST




TTTTSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence LIMKVFHLSYLHNCETRRGQILLWSGSKVFEELTDIERQFHKALYTVRAFLNCDRYSVGLLDMTKQKEFF
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Known secondary structure (DSSP) TTTTTTTTS

SSTTTT








S

 .........290.........300.........310.........320.........330.........340.........350
Sequence DVWPVLMGEAPPYAGPRTPDGREINFYKVIDKVIPNPPPDHWALVSGLPTYVAQNGLICNIMNAPSEDFF
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Known secondary structure (DSSP) STTTT
S





SSSS




















SS

SSS
STTS






S


SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence AFQKEPLDESGNVLSMPIVNKKEEIVGVATFYNRKDGKPFDEMDETLMESLTQFLGWSVLNPDTYELMNK
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Known secondary structure (DSSP)




SSS





B

TTSSS



STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LENRKDIFQDMVKYHVKCDNEEIQTILKTREVYGKEPWECEEEELAEILQGELPDADKYEINKFHFSDLP
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Known secondary structure (DSSP)


SSSS
TTTT


TTS
TTSS
S

TT
T
SSS



TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LTELELVKCGIQMYYELKVVDKFHIPQEALVRFMYSLSKGYRRITYHNWRHGFNVGQTMFSLLVTGKLKR
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Known secondary structure (DSSP) S
TTTT
T

S

SSSSSTT

GG
 .........570.........580.........590.........600.........610.........620.........630
Sequence YFTDLEALAMVTAAFCHDIDHRGTNNLYQMKSQNPLAKLHGSSILERHHLEFGKTLLRDESLNIFQNLNR
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Known secondary structure (DSSP) GS
TTTT

SS
TT

SSSTSTTT
STTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence RQHEHAIHMMDIAIIATDLALYFKKRTMFQKIVDQSKTYETQQEWTQYMMLDQTRKEIVMAMMMTACDLS
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Known secondary structure (DSSP) SSSTTTS
SSS

T
SG
 .........710.........720.........730.........740.........750.........760.........770
Sequence AITKPWEVQSKVALLVAAEFWEQGDLERTVLQQNPIPMMDRNKADELPKLQVGFIDFVCTFVYKEFSRFH
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Known secondary structure (DSSP) GGGS
T




TTS
GGGGGG
 .........780.........790.........800
Sequence EEITPMLDGITNNRKEWKALADEYETKMKG
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Known secondary structure (DSSP) GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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