Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mu1C_

Fold library idPDB HeaderMoleculeTitle
c6mu1C_4.10PDB header: membrane proteinChain: C: PDB Molecule: inositol 1,4,5-trisphosphate receptor type 1;


Added to library: Sat Dec 8 11:34:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFW
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)






SS
B
BSSS

B

TTT
SS
TTS

SSS

S

TT




B




 .........80.........90.........100.........110.........120.........130.........140
Sequence KAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLE
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TS
SS
TT


BTT


B
B
SSS

B

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVN
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) SSS

SS

GGG





SS

S
TTSB

TT






TTT





BTTBTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence CNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWE
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) S

B


GGGG
SSS

TT


BBSSS

BTTSS





SS




GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVDPDYSLVSVPEGNDISSIFELDPTTLRGGDSLVPR
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)

SSSS
S



SS


SSSS









S
S

STT
B



TTS

S
TTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence NSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPLKEDKEAFAIVPVSPAEVRDLDFANDASKVLG
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) S

B

B
SSS

BB







SS
SS
S




B
S


TT

B





 .........430.........440.........450.........460.........470.........480.........490
Sequence SIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQ
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) S


STTTTTTS
TT
S


SSSS

SSSS
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence APFTDCGDHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQITALLHNNRKLLEKHITAAEIDT
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)


SSS



SSS



 .........570.........580.........590.........600.........610.........620.........630
Sequence FVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPTNADILIRSKSVRELAQDAKEGQKEDRD
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)




TTTTTTS


SSSSST
 .........640.........650.........660.........670.........680.........690.........700
Sequence VLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMSDENLPYDLRASFCRLMLHMHVDRDPQEQV
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) T
TTS
STT

S
TTTTT



 .........710.........720.........730.........740.........750.........760.........770
Sequence TPVKYARLWSEIPSEIAIDDYDSSGASKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVN
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP)






SS


TT
SS
SS



SBTS
SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LARNLIYFGFYNFSDLLRLTKILLAILDCVPEKEDIMVMDTKLKIIEILQFILNVRLDYRISCLLCIFKR
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP)






SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence EFDESNSQSVPGALDFEHIEEQAEGIFGHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQA
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP)



TTSSTTT


T
S

T
 .........920.........930.........940.........950.........960.........970.........980
Sequence FKQVQLSQDVDNYKQIKQDLDQLRSIVEKSESYNYRVVKEILIRLSKLCVQESASVRKSRKQQQRLLRNM
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)





T


STTTSTTT



SSSSS
TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GKAEDTKMQEIMRLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVV
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP)



SS


SS
SS


SSTTS
SSTS

S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QHFVHCIETHGRNVQYIKFLQTIVKIKKCQDMVMAELVNSGEDVLVFYNDRASFQTLIQMMRLFMYHIHL
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP) TTSTTS
S

S



T
STTSS


SS







 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence VELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMW
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP) TS
SSSSTT


S


SS
TTTT

TTS

SS
GGGGTTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence KLFENFLVDSVLEKYVTEIVMSIVTTFLQTRQPVFVQLLQGVFRVYHCNWLMPSQKASVESCIRRNIIER
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) T




TTS





TT


SSSS
S



 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCI
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP) STTTTTT
GGGSSSS

SS

ST
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence KVLQTLREMMTKDRGYGSRGEMSLAEVQCHLDKEGASNLVIDLIMNASSDRVFHESILLAIALLEGGNTT
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP)

SSS





SSTTTTTT



TTTGGGTT
TT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence IQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTDDLEMSAVITIMQPILRFLQLLCENHNRD
Predicted secondary structure


SS confidence





































































Known secondary structure (DSSP) TTS
S





S
STTSSTT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYCQGPCHENQN
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP)
S

TT
SSS

TTTTTTSS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence CIATHESNGIDIITALILNDINPLGKKRMDLVLELKNNASKLLLAIMESRHDSENAERILYNMRPKELVE
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) T



SS

TT



S
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence VIKKAYMQGEVEFEDGENGEDGAASPRNVGHNIYILAHQLARHNKELQTMLKPGGQVDGDEALEFYAKHT
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP) T



TTS




SSS
T

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence AQIEIVRLDRTMEQIVFPVPSICEFLTKESKLRIYYTTERDEQGSKINDFFLRSEDLFNEMNWQKKLRAQ
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)






SSS









SSTT


TGGG



SSSSS
TGGG
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence PVLYWCARNMSFWSSISFNLAVLMNLLVAFFYPFKGVRGGTLALIASTILRLIFSVGLQPTLFLLGAFNV
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TTT
SSS


S



SS
SS
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence CNKIIFLMSFVGNCGTFTRGYRAMVLDVEFLYHLLYLLICAMGLFVHEFFYSLLLFDLVYREETLLNVIK
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) S
TT


S
S

S


 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence SVTRNGRPIILTAALALILVYLFSIVGYLFFKDDFILEETEQDKEHTCETLLMCIVTVLSHGLRSGGGVG
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTTGGGTTTST









SS

S




SSSTTT
SS

S
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence DVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLNLIFGVIIDTFADLRSEKQKKEEILKTTCFICGLERDK
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)





TT
TTTTS
SS

S

 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence FDNKTVTFEEHIKEEHNMWHYLCFIVLVKVKDSTEYTGPESYVAEMIRERNLDWFPRMRAMSLVSSDSEG
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) SS

TTTT
TTS
SSTTTTTTTTT
S

S

SS

S


 .........2110.........2120.........2130.........2140.........
Sequence EQNELRNLQEKLESTMKLVTNLSGQLSELKDQMTEQRKQKQRIGLLGHP
Predicted secondary structure



SS confidence
















































Known secondary structure (DSSP)


TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D