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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mn5A_

Fold library idPDB HeaderMoleculeTitle
c6mn5A_2.58PDB header: transferase/antibioticChain: A: PDB Molecule: aminoglycoside n(3)-acetyltransferase, aac(3)-iva;


Added to library: Sat Oct 27 08:33:15 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QMMQYEWRKAELIGQLLNLGVTPGGVLLVHSSFRSVRPLEDGPLGLIEALRAALGPGGTLVMPSWSGLDD
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Known secondary structure (DSSP)

S


B
T

TTS


BTT
TT





SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EPFDPATSPVTPDLGVVSDTFWRLPNVKRSAHPFAFAAAGPQAEQIISDPLPLPPHSPASPVARVHELDG
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Known secondary structure (DSSP) S


TTT



GGG
TTSTT

SSTT
STTS




SSTTSSSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QVLLLGVGHDANTTLALAELMAKVPYGVPRHCTILQDGKLVRVDYLENDHCCERFALADRWLKEKSLQKE
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Known secondary structure (DSSP) S

GGG
TT
S

TT

S

GGGGGTT
 .........220.........230.........240.........250.........
Sequence GPVGHAFARLIRSRDIVATALGQLGRDPLIFLHPPEAGCEECDAARQSI
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Known secondary structure (DSSP) TTTT
TTTTS

GGGT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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