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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mjpG_

Fold library idPDB HeaderMoleculeTitle
c6mjpG_2.85PDB header: lipid transportChain: G: PDB Molecule: lps export abc transporter permease lptg;


Added to library: Sat Mar 30 08:40:59 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFPMAA
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Known secondary structure (DSSP)


TT
SSTT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKMARDMRAFATSG
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Known secondary structure (DSSP) TTTTT

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GAIVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVN
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Known secondary structure (DSSP) S


TT
SS
TTS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIA
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Known secondary structure (DSSP) TT

S

TSSS
GGGS
TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence VMMLMALSFIFGPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLL
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Known secondary structure (DSSP) TTTSSS
TT

 ....
Sequence GRKL
Predicted secondary structure
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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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