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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mhvD_

Fold library idPDB HeaderMoleculeTitle
c6mhvD_3.50PDB header: transport proteinChain: D: PDB Molecule: transient receptor potential cation channel subfamily v


Added to library: Sat Oct 6 08:57:49 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLKKRIFAAVSEGCVEELVELLVELQELCRRRHDEDVPDFLMHKLTASDTGKTCLMKALLNINPNTKEIV
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Known secondary structure (DSSP)

S
STT

SSTTTTS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RILLAFAEENDILGRFINAEYTEEAYEGQTALNIAIERRQGDIAALLIAAGADVNAHAKGAFFNPKYQHE
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Known secondary structure (DSSP) TT
T



SSSSTT

TT
TT

TT



STTTS
SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GFYFGETPLALAACTNQPEIVQLLMEHEQTDITSRDSRGNNILHALVTVAEDFKTQNDFVKRMYDMILLR
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Known secondary structure (DSSP)


S
SSTT
STT

TT


TTS

T



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGNWELETTRNNDGLTPLQLAAKMGKAEILKYILSREIKEKRLRSLSRKFTDWAYGPVSSSLYDLTNVDT
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Known secondary structure (DSSP) S
SS


TTS

TT

S




STT
TT
S
SSS
TTTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence TTDNSVLEITVYNTNIDNRHEMLTLEPLHTLLHMKWKKFAKHMFFLSFCFYFFYNITLTLVSYYRGWLQL
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Known secondary structure (DSSP) TSTT
T

S
S
TSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence LGRMFVLIWAMCISVKEGIAIFLLSDAWFHFVFFIQAVLVILSVFLYLFAYKEYLACLVLAMALGWANML
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Known secondary structure (DSSP)


STT
STTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YYTRGFQSMGMYSVMIQKVILHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELF
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Known secondary structure (DSSP) GGGGSSTT
S

TT
TTT

S
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence KLTIGLGDLNIQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF
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Known secondary structure (DSSP) T
S




SS
S
TTTTTT
 .........570.........580.........590.........600.........610...
Sequence EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPV
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Known secondary structure (DSSP) S
S

STT

S







S
SS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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