PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6mfuD_

Fold library id	PDB Header	Molecule	Title
c6mfuD_	1.60	PDB header: hydrolase	Chain: D: PDB Molecule: guanylate kinase;

Links to external resources
Added to library: Sat Sep 29 08:35:39 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R P I N P D V V N R P L V I C G P S G T G K S T L L K T L F E S Q P N T F G F S V S H T T R K P R P G E E N G R E Y H F V T K E E F M E G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T S S S T T T
S S
T T
B T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G K G E F L E W A E F G G N C Y G T T F A A L T A L H P R R C I L D I E L Q G V L Q L K A K A P L Q T P P L E P V F L F L S P P S I S Q L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T T T S
G G G S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S R L S G R G T E T D A S I R K R L D A A K E E L R Y A K E G K Y D V Y V V N D D L K V A G E K L E K V A M G W E G W K T C G D T L P E L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S S
S S T
T T G G G

. . . . .

Sequence L A E L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	I	N	P	D	V	V	N	R	P	L	V	I	C	G	P	S	G	T	G	K	S	T	L	L	K	T	L	F	E	S	Q	P	N	T	F	G	F	S	V	S	H	T	T	R	K	P	R	P	G	E	E	N	G	R	E	Y	H	F	V	T	K	E	E	F	M	E	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S								T	T	S	S												S	T	T	T									S	S				T	T			B	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	G	E	F	L	E	W	A	E	F	G	G	N	C	Y	G	T	T	F	A	A	L	T	A	L	H	P	R	R	C	I	L	D	I	E	L	Q	G	V	L	Q	L	K	A	K	A	P	L	Q	T	P	P	L	E	P	V	F	L	F	L	S	P	P	S	I	S	Q	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T	T												T	T	T	T	S																		G	G	G	S	S	S												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	R	L	S	G	R	G	T	E	T	D	A	S	I	R	K	R	L	D	A	A	K	E	E	L	R	Y	A	K	E	G	K	Y	D	V	Y	V	V	N	D	D	L	K	V	A	G	E	K	L	E	K	V	A	M	G	W	E	G	W	K	T	C	G	D	T	L	P	E	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																				T	T	T		S	S						S	S														T		T	T	G	G	G
	.	.	.	.	.
Sequence	L	A	E	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G