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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mf0A_

Fold library idPDB HeaderMoleculeTitle
c6mf0A_3.20PDB header: blood clottingChain: A: PDB Molecule: coagulation factor viii chimera;


Added to library: Sat Sep 14 08:43:28 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AIRRYYLGAVELSWDYRQSELLRELHVDTRFPATAPGALPLGPSVLYKKTVFVEFTDQLFSVARPRPPWM
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Known secondary structure (DSSP)



SS
TTGGGTTS




SS
S

SS

SSS


BSSTT

SB



TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLLGPTIQAEVYDTVVVTLKNMASHPVSLHAVGVSFWKSSEGAEYEDHTSQREKEDDKVLPGKSQTYVWQ
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Known secondary structure (DSSP) TT
TT
B
SSS
B

SSS


SSS



SS



SGGGSTT
B
SB


B

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLKENGPTASDPPCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLTRERTQNLHEFVLLFAVFDEGKSWH
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Known secondary structure (DSSP)

GGGS

SSS
S

S
TTT

S
TTS


TTSGGGSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SAAQPAMHTVNGYVNRSLPGLIGCHKKSVYWHVIGMGTSPEVHSIFLEGHTFLVRHHRQASLEISPLTFL
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Known secondary structure (DSSP)





BTTB
TB




TTS
SS


TT

TTSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TAQTFLMDLGQFLLFCHISSHHHGGMEAHVRVESCAEKHPKTWVHYIAAEEEDWDYAPLVLAPDDRSYKS
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Known secondary structure (DSSP)

S


SSTTS
S








S

S





SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QYLNNGPQRIGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHG
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Known secondary structure (DSSP) T

BTTB
TTSSTT
SSB



TTSTTS


B

BTT


SSS



S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIG
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Known secondary structure (DSSP)
SSS
SS
SSS
S
TTT



TT


GGGS

SSS
SS

TTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence PLLICYKESDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSV
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Known secondary structure (DSSP) B




S
TTTSTTSS
TT


SS
TTSTTB
TT

B


 .........570.........580.........590.........600.........610.........620.........630
Sequence CLHEVAYWYILSIGAQTDFLSVFFSGYTFKHKMVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRN
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Known secondary structure (DSSP)
TT

SS

S
TT


B
SSSB
S

TT



SB
B

STTSST
 .........640.........650.........660.........670.........680.........690.........700
Sequence RGMTALLKVSSCKRTRHYFIAAVEQLWDYGMSESVPRFKKVVFREFADGSFTQPSYRGELNKHLGLLGPY
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Known secondary structure (DSSP) TS


B








S

TT



SSSSTT





STTGGGTTS


 .........710.........720.........730.........740.........750.........760.........770
Sequence IRAEVEDNIMVTFKNQASRPYSFYSSLISYPDDQEQGAEPRHNFVQPNETRTYFWKVQHHMAPTEDEFDC
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Known secondary structure (DSSP)
SSS
SSS
B

B
S




S


SS

B



B
TT


GGGS

TTS
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence KAWAYFSDVDLEKDVHSGLIGPLLICRANTLNAAHGRQVTVQEFALFFTIFDETKSWYFTENVERNCTLK
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Known secondary structure (DSSP)

SSTTTT

TT
SBTTTTB

SSTTTSGGGSGGG
S



G
 .........850.........860.........870.........880.........890.........900.........910
Sequence ENYRFHAINGYVMDTLPGLVMAQNQRIRWYLLSMGSNENIHSIHFSGHVFSVRKKEEYKMAVYNLYPGVF
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Known secondary structure (DSSP) GGSTTB
SS




SS


SSTT


TT

SSSS

TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence ETVEMLPSKVGIWRIECLIGEHLQAGMSTTFLVYSKKCQTPLGMASGHIRDFQITASGQYGQWAPKLARL
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Known secondary structure (DSSP)


S

STT


TT


SSTTS
S
GGG
S

TTT

GGG
BT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence HYSGSINAWSTKEPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTL
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Known secondary structure (DSSP) T

SSS
S

SS




TT
SSSS



TTS
SSS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence MVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKAISDAQITAS
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Known secondary structure (DSSP)



SSSS

SS

TTS

SB
SSSSS
S
TTTS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence SYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLIS
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Known secondary structure (DSSP)




SS



GGG
BTT

STT
SB

SS

TT


SS

TT
 .........1200.........1210.........1220.........1230.........1240.........1250......
Sequence SSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQ
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Known secondary structure (DSSP) SSSS




SSS


B


SSSS

B



SS
B
SSSS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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