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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6m5rA_

Fold library idPDB HeaderMoleculeTitle
c6m5rA_3.50PDB header: viral proteinChain: A: PDB Molecule: tripartite terminase subunit 3;


Added to library: Sat Oct 31 08:30:18 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TMGGDALRVPFLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLKGRDFGGDHTA
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Known secondary structure (DSSP)



GGGS








S
TTT

TTS

GGGTS
TTTTS
GGGS
SSS
SSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLEFLAPELVRAVARLRFKECAPADVVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRAS
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Known secondary structure (DSSP) TTS


T






TTTTT
S
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLTGRTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDAAVRHFRQRATVFLVPRR
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Known secondary structure (DSSP)





S




STTTTTTTT

S

GGGSS

B
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence HGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFEEIDACLRGWFGSARVDHVKGETISFSFPDGSR
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Known secondary structure (DSSP) TTSSSSS
B




SSGGGSS
GGG
TTS
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence STIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRG
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Known secondary structure (DSSP)


GGG
SSSSSS
SS








SS

TT
TSTT






B

SSSS

GGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLADSFMQEIIGGQARET
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Known secondary structure (DSSP) S
SS


SS
SSSSGGGGGTTTS
SSS


SS
S
SS



T
GGGTTS



SSS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GDDRPVLTKSAGERFLLYRPSTTTNSGLMAPDLYVYVDPAFTANTRASGTGVAVVGRYRDDYIIFALEHF
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Known secondary structure (DSSP) TT



S




STT
GGGB
S



SSSTT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence FLRALTGSAPADIARCVVHSLTQVLALHPGAFRGVRVAVEGNSSQDSAVAIATHVHTEMHRGPELLFYHC
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Known secondary structure (DSSP)

TT
S
STT

SB
SS
T




B
 .........570.........580.........590.........600.........610.........620.........630
Sequence EPPGSAVLYPFFLLNKQKTPAFEHFIKKFNSGGVMASQEIVSATVRLQTDPVEYLLEQLNNLTSDDLMVA
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Known secondary structure (DSSP)

TT



BS
B

STTTT

SSSSSSS
TT



 .........640......
Sequence VIMAIYLAAQAGPPHT
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Known secondary structure (DSSP) S
S

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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