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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6m0wA_

Fold library idPDB HeaderMoleculeTitle
c6m0wA_2.76PDB header: hydrolase/dna/rnaChain: A: PDB Molecule: crispr-associated endonuclease cas9 1;


Added to library: Sat Sep 12 08:55:14 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGSDLVLGLDIGIGSVGVGILNKVTGEIIHKNSRIFPAAQAENNLVRRTNRQGRRLARRKKHRRVRLNRL
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Known secondary structure (DSSP)

SS
SSTTT



GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FEESGLITDFTKISINLNPYQLRVKGLTDELSNEELFIALKNMVKHRGISYKTPGQIQLERYQTYGQLRG
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Known secondary structure (DSSP) TTS
S

SS

S
S
TTTS





B



S

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DFTVEKDGKKHRLINVFPTSAYRSEALRILQTQQEFNPQITDEFINRYLEILTGKRKYYHGPGNEKSRTD
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Known secondary structure (DSSP) TTS

B
SS





TTT
S

SSS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence YGRYRTSGETLDNIFGILIGKCTFYPDEFRAAKASYTAQEFNLLNDLNNLTVPTETKKLSKEQKNQIINY
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Known secondary structure (DSSP) TSSB
TTS
B
S
TTGGGS
B
SSSTTSB

BTTSTT
B
SSTTSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence VKNEKAMGPAKLFKYIAKLLDVADIKGYRIDKSGKAEIHTFEAYRKMKTLETLDIEQMDRETLDKLAYVL
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Known secondary structure (DSSP)
SS

TTT

GGG
B

B

SSS

B



TT
SSS
SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TLNTEREGIQEALEHEFADGSFSQKQVDELVQFRKANSSIFGKGWHNFSVKLMMELIPELYETSEEQMTI
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Known secondary structure (DSSP)

SS
TTS

TTTS
B
SS



 .........430.........440.........450.........460.........470.........480.........490
Sequence LTRLGYIDEKLLTEEIYNPVVAKSVRQAIKIVNAAIKEYGDFDNIVIEMARETNEDDEKKAIQKIQKANK
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Known secondary structure (DSSP)



TTT





S





 .........500.........510.........520.........530.........540.........550.........560
Sequence DEKDAAMLKAANQYNGKAELPHSVFHGHKQLATKIRLWHQQGERCLYTGKTISIHDLINNSNQFEVDAIL
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Known secondary structure (DSSP) TSSSS

GGGGTT
TTTTTB
TTT

B

SGGGSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence PLSITFDDSLANKVLVYATANQEKGQRTPYQALDSMDDAWSFRELKAFVRESKTLSNKKKEYLLTEEDIS
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Known secondary structure (DSSP)



SGGG
SS
TTT
SSS


SSS






 .........640.........650.........660.........670.........680.........690.........700
Sequence KFDVIERNLVDTRYASRVVLNALQEHFRAHKIDTKVSVVRGQFTSQLRRHWGIEKTRDTYHHHAVDALII
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Known secondary structure (DSSP) TT


T



SS



TTST
 .........710.........720.........730.........740.........750.........760.........770
Sequence AASSQLNLAPYQHFVDTLKSKEFEDSILFSYQVDSKFNRKISDATIYATRQAKVGKDKADETYVLGKIKD
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Known secondary structure (DSSP) GGG

T
TT


B


S


S
S



SS
SS
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence IYTQDGYDAFMKIYKKDKSKFLMYRHDPQTFEKVIEPILENYPNKVPCNPFLKYKEEHGYIRKYSKKGNG
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Known secondary structure (DSSP) TTSGGGB
TS






SS
B


SSS

 .........850.........860.........870.........880.........890.........900.........910
Sequence PEIKSLKYYDSKLGNHIDITPKDSNNKVVLQSVSPWRADVYFNKTTGKYEILGLKYADLQFEKGTGTYKI
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Known secondary structure (DSSP)
B




S



TT
SS

S


TTT

GGG

TTT


 .........920.........930.........940.........950.........960.........970.........980
Sequence SQEKYNDIKKKEGVDSDSEFKFTLYKNDLLLVKDTETKEQQLFRFLSRTMPKQKHYVELKPYDKQKFEGG
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Known secondary structure (DSSP)
TT

TTSBT
SSSS


TTSTT
SSSS


S
 .........990.........1000.........1010.........1020.........1030..
Sequence EALIKVLGNVANSGQCKKGLGKSNISIYKVRTDVLGNQHIIKNEGDKPKLDF
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Known secondary structure (DSSP)



TTT
S

TTS



SS
TT

S


SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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