Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6m02C_

Fold library idPDB HeaderMoleculeTitle
c6m02C_3.20PDB header: membrane proteinChain: C: PDB Molecule: pannexin-1;


Added to library: Sat Mar 28 08:30:25 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATEYVFSDFLLKEFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSPSSFSWRQAAFVD
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

S
TTGGGT



TT


S
TTTT
STTTT


TTS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SYCWAAVQQKNSLQSESGNLPLWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYN
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSSS
S




STT


STTTTSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RAIKAAKSARDSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLACIYLGYYFSLSSLSDEFV
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TTT





SS
TTTTSSS

SSTTTS
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CSIKSGILRNDSTVPDQFQCKLIAVGIFQLLSVINLVVYVLLAPVVVYTLFVPFRQKTDVLKVYEILPTF
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)



TTGGG
SSS
S
STTT
TTTS


SSSGGGGGSTT
 .........290.........300.........310.........320.........330.....
Sequence DVLHFKSEGYNDLSLYNLFLEENISEVKSYKCLKVLENIKANNGEKNARQRLLDS
Predicted secondary structure






SS confidence






















































Known secondary structure (DSSP) S






SS
GGG
TT


TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D