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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6m02C_

Fold library idPDB HeaderMoleculeTitle
c6m02C_3.20PDB header: membrane proteinChain: C: PDB Molecule: pannexin-1;


Added to library: Sat Mar 28 08:30:25 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATEYVFSDFLLKEFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSPSSFSWRQAAFVD
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Known secondary structure (DSSP)

S
TTGGGT



TT


S
TTTT
STTTT


TTS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SYCWAAVQQKNSLQSESGNLPLWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYN
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Known secondary structure (DSSP) SSSS
S




STT


STTTTSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RAIKAAKSARDSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLACIYLGYYFSLSSLSDEFV
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Known secondary structure (DSSP) TTT





SS
TTTTSSS

SSTTTS
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CSIKSGILRNDSTVPDQFQCKLIAVGIFQLLSVINLVVYVLLAPVVVYTLFVPFRQKTDVLKVYEILPTF
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Known secondary structure (DSSP)



TTGGG
SSS
S
STTT
TTTS


SSSGGGGGSTT
 .........290.........300.........310.........320.........330.....
Sequence DVLHFKSEGYNDLSLYNLFLEENISEVKSYKCLKVLENIKANNGEKNARQRLLDS
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Known secondary structure (DSSP) S






SS
GGG
TT


TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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