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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lvfB_

Fold library idPDB HeaderMoleculeTitle
c6lvfB_3.70PDB header: membrane proteinChain: B: PDB Molecule: low ph-inducible protein lpia;


Added to library: Sat Feb 6 08:54:30 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLNRYRALIVAVLTVAVFCIAAYAIYDLTTEVRYDDVVHALTTTKISSVLLALLFTGLSFASLIFYDQNA
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Known secondary structure (DSSP)
TT


SSTTT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LEYIGKRLPFPHVALTSFSAYAVGNTAGFGALSAGAIRYRAYTRLGLSPDDITRVIAFVTLAFGLGLASV
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Known secondary structure (DSSP) SS



TSSTT

SSSSSSTTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GAMALLVIADEIGPLISVDGLWLRLIAIAILAALAFVVYAGRNGREVRIGPVAVRLPDSRTWSRQFLVTA
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Known secondary structure (DSSP) TTS
SSSSTTTTT

TSSS


SSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence FDIAASASVLYVLLPETSIGWPGFFAIYAIAVGLGVLSHVPAGFGVFETIIIAWLGSSVNEDAVLSSLVL
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Known secondary structure (DSSP) S
S
SS
TTTT
GGG
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YRVIYNVIPLVIAIAAISVAELRSSMRRIGARLMPQLLSAFALLLGMMLVFSSVTPTPDHNLIVESAHFL
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Known secondary structure (DSSP) T



S

SS






SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SSLLGLAIIVAARGLSQRLDGAWWVSTFSALFALFFSLLKAIAIVEAGLLAFFVFSLVVSRRLFKRPASL
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Known secondary structure (DSSP) TT
STTTTT


TTTT





S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LNQTLTAGWLTAIAVVCIGAIVVLFFVYRDVAPRGLRAALGISIVSSAIAIPVSDDAVARAVEIVRKQGV
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Known secondary structure (DSSP) S
S


TTTT






TSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ADANLVRMGDKSIMFSEKGDAFIMYGKQGRSWIALFDPVGPRQALPDLIWRFVETARAAGCRSVFYQISP
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Known secondary structure (DSSP) GGGGGSTT
SS

TTSS


B
SS


S

BS
STTTT



SB
G
 .........570.........580.........590.........600.........610.........620.........630
Sequence ALLSYCADAGLRAFKLGELAVVNLANFELKGGKWANLRQTASRAVRDGLEFAVIEPQDIPDVLDQLAHVS
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Known secondary structure (DSSP) GGGGGSSTT

SSTTTTTTT






TT

TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence DTWLADHNAKEKSFSLGAFDPDYVCSQPVGVLKKDGKIVAFANILMTETKEEGSVDLMRFSPDAPKGSMD
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Known secondary structure (DSSP) TS


SSSS

S
TTTTTTS
SSSS

TTSS



TT

GGGSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence FLFVQILEYLKGEGFQRFNLGMAPLSGMSRRESAPVWDRVGGTVFEHGERFYNFKGLRAFKSKFHPEWQP
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Known secondary structure (DSSP) T
S


S

TT

SSSS

TT

B

 .........780.........790...
Sequence RYLAVSGGVSPMIALMDATFLIG
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Known secondary structure (DSSP) TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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