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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ltuA_

Fold library idPDB HeaderMoleculeTitle
c6ltuA_2.57PDB header: hydrolase/rna/dnaChain: A: PDB Molecule: cas12i2;


Added to library: Sat Oct 31 08:34:45 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMSSAIKSYKSVLRPNERKNQLLKSTIQCLEDGSAFFFKMLQGLFGGITPEIVRFSTEQEKQQQDIALWC
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Known secondary structure (DSSP)
B


T

TTT
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence AVNWFRPVSQDSLTHTIASDNLVEKFEEYYGGTASDAIKQYFSASIGESYYWNDCRQQYYDLCRELGVEV
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Known secondary structure (DSSP)
TTT

SB

TS


SB

TT
T

 .........150.........160.........170.........180.........190.........200.........210
Sequence SDLTHDLEILCREKCLAVATESNQNNSIISVLFGTGEKEDRSVKLRITKKILEAISNLKEIPKNVAPIQE
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Known secondary structure (DSSP) TTSS
BTTB


TT

S



S
SS

SBS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IILNVAKATKETFRQVYAGNLGAPSTLEKFIAKDGQKEFDLKKLQTDLKKVIRGKSKERDWCCQEELRSY
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Known secondary structure (DSSP) T

TTTTT
SS

S
SSSB

SS



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VEQNTIQYDLWAWGEMFNKAHTALKIKSTRNYNFAKQRLEQFKEIQSLNNLLVVKKLNDFFDSEFFSGEE
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Known secondary structure (DSSP) S
S

S

GGGGSTT


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TYTICVHHLGGKDLSKLYKAWEDDPADPENAIVVLCDDLKNNFKKEPIRNILRYIFTIRQECSAQDILAA
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Known secondary structure (DSSP)




GGGGTGGGSTT


SSB



TTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AKYNQQLDRYKSQKANPSVLGNQGFTWTNAVILPEKAQRNDRPNSLDLRIWLYLKLRHPDGRWKKHHIPF
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Known secondary structure (DSSP)
B


B





TT
B

GGG




BTTB



TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YDTRFFQEIYAAGNSPVDTCQFRTPRFGYHLPKLTDQTAIRVNKKHVKAAKTEARIRLAIQQGTLPVSNL
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Known secondary structure (DSSP)
TTS



SS
SSSSGGGT






TT





GGGT



S
 .........570.........580.........590.........600.........610.........620.........630
Sequence KITEISATINSKGQVRIPVKFDVGRQKGTLQIGDRFCGYDQNQTASHAYSLWEVVKEGQYHKELGCFVRF
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Known secondary structure (DSSP)






TT



S

TT


SSS

SSSTTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence ISSGDIVSITENRGNQFDQLSYEGLAYPQYADWRKKASKFVSLWQITKKNKKKEIVTVEAKEKFDAICKY
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Known secondary structure (DSSP)


TTTTT




GGGGTT


SSS

T
 .........710.........720.........730.........740.........750.........760.........770
Sequence QPRLYKFNKEYAYLLRDIVRGKSLVELQQIRQEIFRFIEQDCGVTRLGSLSLSTLETVKAVKGIIYSYFS
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Known secondary structure (DSSP)


TT

STTSTTT


SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence TALNASKNNPISDEQRKEFDPELFALLEKLELIRTRKKKQKVERIANSLIQTCLENNIKFIRGEGDLSTT
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Known secondary structure (DSSP) TT

SSS



TT

S




 .........850.........860.........870.........880.........890.........900.........910
Sequence NNATKKKANSRSMDWLARGVFNKIRQLAPMHNITLFGCGSLYTSHQDPLVHRNPDKAMKCRWAAIPVKDI
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Known secondary structure (DSSP)
TTB

GGGGT


TTTTTB
TTTTTSSS

B


GGG
 .........920.........930.........940.........950.........960.........970.........980
Sequence GDWVLRKLSQNLRAKNIGTGEYYHQGVKEFLSHYELQDLEEELLKWRSDRKSNIPCWVLQNRLAEKLGNK
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Known secondary structure (DSSP)
TT

TTTTT
T

TT
TTS

SSS
 .........990.........1000.........1010.........1020.........1030....
Sequence EAVVYIPVRGGRIYFATHKVATGAVSIVFDQKQVWVCNADHVAAANIALTVKGI
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Known secondary structure (DSSP) SS
TT
SSS

STT

SS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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