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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6loeB_

Fold library idPDB HeaderMoleculeTitle
c6loeB_3.50PDB header: photosynthesisChain: B: PDB Molecule: fe-s-cluster-containing hydrogenase components 1-like


Added to library: Sat Nov 7 08:50:26 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CQFALKQPQEKIVPYVRQPEEIIHGRPLFFATAVTFAGFGVGLLVESHEGRPTKIEGNPDHPASLGSTDL
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Known secondary structure (DSSP)



SS








SS

TT

TT


B





SSSS


SSSS
TT
SS
SS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ITQAMILTMYDPDRSQAPTNAGQETTWDAFVAAATAAMQAQTAKQGAGLRVLSGSLTSPTLIAQKQQLLT
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Known secondary structure (DSSP) TTTGGGTTTT
TTB

S
TT

TTTTTS
S

B


S


 .........150.........160.........170.........180.........190.........200.........210
Sequence QFPQAKWYEYEPVGRDNANAGARLAFGADVHTIYRLDTAKVIVGFDADFTAPSPTGVRMARQLADGRRIR
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Known secondary structure (DSSP) STT

B



SSSSTTSS



TT
SB
BT


SSSSTTTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence KGTKEVNRLYLAESTPSITGLLADHRLPVRSSQIEHLVRALATLVGVPNVAAGAPLSDTEKKWVEAAAKD
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Known secondary structure (DSSP) TT






B


SS

TTTTT
SB




SSSGGGTTT
TT



S


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LQANRGACVVLVGESQPPVVHALGHAINAQLGNVGSTVVYTEPVEDDPSGGIAALSALTQEMNAGTVEVL
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Known secondary structure (DSSP) SSSSSS

B
SSS
TTTT
BTTT

SSS
SS
SGGG

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMIESNPVYNAPADIPFAEALAKVPLSMHVGLYRDETAQQSVWHINGAHFLEAWGDVRAFDGTTTIVQPL
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Known secondary structure (DSSP)
S

S
SSS
TTSSSB
SB

TTTTTSS

B



TTS


GGG


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence IAPLYNGKSAIEVLNVLLGKPQETGYQTLTAYWQTQDASGNFRVFWNTALHDGVITATQARSRQVTLQQG
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Known secondary structure (DSSP) S

SS



T
TTS


SS
SSB

SS


B





S
 .........500.........510.........520.........530.........540.........550.........560
Sequence FADAAPPAPTQGLEIVFRPDPSLWDGAFANNAWLQETPKPYTKLTWDNVALMSVRTANALGLKNGDVVRL
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Known secondary structure (DSSP) TT
S






S


SSSSSSTTTT
SS

SSS
BSS



STTT

SS


 .........570.........580.........590.........600.........610.........620.........630
Sequence TYQGRSVDAPVWVQPGHADDSVTVHFGFGRTAAGRVGNNVGFNAYRLRTSATPWFGVGLEVAKVGENYKL
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Known secondary structure (DSSP) TT


TTS
TTSS


TTS
SSSSS



GGGG

SSSSSS










 .........640.........650.........660.........670.........680.........690.........700
Sequence ASTQGHFLMEGRKKDLVRYGTLAEYVEDEKFLQVEKEEPISLIGEYEYNGYKWGMSIDLNVCNSCNACVV
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Known secondary structure (DSSP)
BS



S

S
TTTS


TTTTSS
TTSSS








S





S

BGGG




 .........710.........720.........730.........740.........750.........760.........770
Sequence ACQSENNIPVVGKDEVWLGREMHWIRIDQYYVGDEHTPNVYNMVMLCQQCEHAPCEIVCPVAATVHDAEG
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Known secondary structure (DSSP) T




TTT



SSB

B

BS
TTS
B

B

B




TT
TTTTT
TT

SB

SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LNNMVYNRCVGTKYCSNNCPYKVRRFNFLQYQDVPYRSPIDASTENDSIPVLKMMRNPDVTVRARGVMEK
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Known secondary structure (DSSP) S
B

SSS

S


SS




S

SSTTTS
TT

SSTT


TTGGGTS
TTS



SS

 .........850.........860.........870.........880.........890.........900.........910
Sequence CTFCVQRINEARIQARTENRRIADGEIMTACQQVCPTQAIVFGDLNDPQARVVDLKEQPLKYTSLDKLNT
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Known secondary structure (DSSP)

S
TT



TTT


TTTTT
TT

SSSTTSTTTTTSSSTT
TTTTS

 .........920.........
Sequence KPRVSYLAKIKNLNPDLAE
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Known secondary structure (DSSP)

SB







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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