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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ln0A_

Fold library idPDB HeaderMoleculeTitle
c6ln0A_2.46PDB header: viral proteinChain: A: PDB Molecule: nonstructural protein 3;


Added to library: Sat May 8 08:57:19 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPPEAIKQPSPTKVELVVGELASIKFDNSVLVNPANAQLTNGGGAARAIAKLAGPKYQEYCNSVAPISGP
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Known secondary structure (DSSP)

GGG




S
GGG


SS

TT



S

S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTTDSFDAKKLGVACILHVVPPKGSDPNVQELLYQAYKSILTEPAHYVIPILGAGIFGCNPVHSLDAFRK
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Known secondary structure (DSSP)
GGGGGGT



SSSTT

SSS

SS
STT


 .........150.........160.........170.........180.........190.........200.........210
Sequence ACPSDIGRVTLVTMNKNHLQVWDALNRTIVRTTTDYDQVTTKALTPQGVLEANLFDGEDFVQEPKPGQIY
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Known secondary structure (DSSP)

SS
S
SST
SSSSS

T
SSSB
SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEVTEEVQNQAKELDLNLQQYCVYLKTCHHKWVVSRTNGLMHLKQKDNNCFVSAGVNLFQNTAYQFRPAI
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Known secondary structure (DSSP)

TT

TT



TT


TTTTS


B
 .........290.........300.........310.........320.........330.........340.........350
Sequence DALYREYLNGNPNRFVAWIYASTNRRVGEMGCPQQVISLLVSNSDAAFSATTACCNTYFNHTGVISVARE
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Known secondary structure (DSSP) TTT

TT

TTS


TBT
TTT

S


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence YDPIQPKVYCMKCDVWTPFTPQSGKGAVAIGTSADEPTGPAIKFAAAHCWYTNGKKTVNGYDTKANVVAT
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Known secondary structure (DSSP)

TTS

TTTT
SSSS

SSSTT
SSS
BSS

S

 .....
Sequence YHRFD
Predicted secondary structure


SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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