Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lcrA_

Fold library idPDB HeaderMoleculeTitle
c6lcrA_3.40PDB header: lipid transportChain: A: PDB Molecule: phospholipid-transporting atpase;


Added to library: Sat May 2 09:15:34 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLNSVPLIVIITVTAIKDAIEDYRRTINAPVHRLSGKARFHKDAWKNLVVGDFVRIYNDDELPADIIILA
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
TTTT





SSS
GGG

TT


TT

SSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence TSDPDGACYVETKNLDGETNLKVRQALRCGRTLKHARDCERAQFVIESEPPQPNLYKYNGGIDNLLLRGC
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP) SSGGG
TTTSS

S


STT



SSSTTSS







S


STT





TT
B
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HLRNTEWALGVVVFTGHDTKIMMNAPSKRARIARELNFNVICNFGILLIMCLIAAIANGIAWGKTDASLA
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) S
S

S

TT
S






S
TS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence WFEYGSIGGTPALTGFITFWAAVIVFQNLVPISLYISLEIVRTLQAFFIYSDVGMYYEKIDQPCIPKSWN
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S
S
SSS
GGGGSTT
STT
BTTTTB


BS
GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence ISDDVGQIEYIFSDKTGTLTQNVMEFKKATINGQPYGEAYTEAQAGMDRRRGINVEEEAKVIREEIAAAK
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP) GTTGGGG


SSSSSTT




TSSTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VRAIRGLRELHDNPYLHDEDMTFIAPDFVEDLAGKNGPEQQQATEHFMLALALCHTVVAEKQPGDPPKMI
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TSS

TT

TT





TTT
STTTS




SSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence FKAQSPDEAALVATARDMGFTVLGMSDGGINVNVMGKDMHFPVLSIIEFNSSRKRMSTIVRMPDGRILLF
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
S
TTGGGS

SSSTT




TTTS
TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence CKGADSVIYSRLKKGEQADMRRETAQHLEMFAVEGLRTLCIAERELSEEEYREWRREHDLAATALENREE
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
TTSS
TTSST





S

TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KLEEVADKIERDLTLLGGTAIEDRLQDGVPDTIALLADAGIKLWVLTGDKVETAINIGFSCNLLNNDMDL
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TS


TTT



S
TTSS
SS


 .........640.........650.........660.........670.........680.........690.........700
Sequence LRLQVNESDASTEDDYLQLAEEQLKTNLERFNMTGDDEELKRARKDHNAPSPTYALVIDGFTLRWVLSDS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


S
STT
TSS
SS
TT





TT

TTTSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence LKQKFLLLCKQCKSVLCCRVSPAQKAAVVSMVKNGLDVMTLSIGDGANDVAMIQEADVGVGIAGEEGRQA
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) T
ST

SS



SGGGSSS

SS
STT
 .........780.........790.........800.........810.........820.........830.........840
Sequence VMSSDFAIGQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMF
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP) TTTSSSSGGGTTTTTTTT



SSTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence NLFFTSVPVILMGVLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVLT
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)



SSS

SS
SS
GGGGTT
SS
TTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence PTAAGNGLDVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTYSAGF
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S

SSSSS


STTS
S


SSTTTSSS
 .........990.........1000.........1010.........1020.........1030.........1040....
Sequence YQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIREQANRGDFAAADAAAVA
Predicted secondary structure














SS confidence































































Known secondary structure (DSSP) SST
SS

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D