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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lceA_

Fold library idPDB HeaderMoleculeTitle
c6lceA_1.78PDB header: sugar binding proteinChain: A: PDB Molecule: abc transporter substrate binding component;


Added to library: Sat Apr 25 13:49:21 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATAEGIPAKGTDDGTEITLWTRSPLERQAKNVVEAYNKSHKNQVKLEIIPNDDXEGKVGGASQTDSLPDI
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Known secondary structure (DSSP)


TT

TT


SS
GGG
SS
GGGTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAGDVVRIPYWASEGIFTDITKQIDGLDNKADLQQGHIEAGTVDGAEYTLPFITDVSVXVWNKNLYKEAG
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Known secondary structure (DSSP) TTTTT
B


T
TTGGGB
TTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDPEQGPKSIDQFVEQAKKVAALNKDGVAGSYLAGQSGGALVFDLFPSVWADGESVXNKDGSEATLDNDS
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Known secondary structure (DSSP)

TT


SSTT

TT
BSB


TT
TT

SB
TTSSSB


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence XKGVLDAYKELANTTNGLGAGSKEETGATWTAPFANGKIGVXPYPNTSTTALFDAEKDGGFEVGVAPIPG
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Known secondary structure (DSSP) TSTTSB
TTTTT

SSSTTTT
BSGGGTT




 .........290.........300.........310.........320.........330.........340.........350
Sequence TKEGKTSTFLGGDAXGISKDSKHVAQAWNFLYWLXQSDAQKEVFADQGDTASNIQTLKTAYKDADPRIQT
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Known secondary structure (DSSP) SSTT

BBTT
S
STGGGT


SBS
TTS
 .........360.........370.........380.........390.........400.......
Sequence INSVIIDGNGQTPKSPAFNEAFNAAGSPWQLLVQNAVWGSGDLKADNKAVTDVLSAQ
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Known secondary structure (DSSP) TT

B



TTTTSTT
S


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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