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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6l8nA_

Fold library idPDB HeaderMoleculeTitle
c6l8nA_3.60PDB header: dna binding proteinChain: A: PDB Molecule: dna repair protein rad5;


Added to library: Sat Nov 14 09:45:18 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RWSRYIGSIHTMGFATRPTVKPVPIGSRLGFKKSSHLVRLIDTSQDRELGRMPEDVARILYPLLDYSEQV
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Known secondary structure (DSSP)




S


S


TT
B



TTT



GGGGGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLEPYLLINNGKRFSVGDNIYIRIDCYLTSQAFVMDTRQLHRAGAIMALFDAINIQPVYALNINQLKSFY
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Known secondary structure (DSSP)



SS


TT

TTTB

T







 .........150.........160.........170.........180.........190.........200.........210
Sequence RITQSAASLQNLPETTPDESLFKLQLRRYQKQSLSWMLKREYEYSHLSEKMNPLWKKFRWPSNSDCFFYA
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Known secondary structure (DSSP) T

S
TT







TTTB
S


TT
GGG





TTS






 .........220.........230.........240.........250.........260.........270.........280
Sequence NLYTGEFSIEKPVIKTIINGGILADEMGLGKTISALALICTASYDEAHEKKIESTDTYAYRTTLIVVPMS
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Known secondary structure (DSSP) TTTTSS







S
TTSS

S





GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLNQWQSEFEKANKDLKKRCEIYYGNNIKDLRAYVLGPNAPSVIITTYGIIQSEYGRTSTSGLFNVVFFR
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Known secondary structure (DSSP) GTTB

TTS


TT
SS
SSTT

S
TT

SSSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IILDEGHTIRNRSTRTSKAVIALRSSRKWILTGTPIINRLDDLFSLVQFLNLEPWSHINYWKRYVSVPFE
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Known secondary structure (DSSP) TGGGG

TTST

S
S
SS
TTT
TTTTST
 .........430.........440.........450.........460.........470.........480.........490
Sequence KGNYAQAFDVINAVLEPVLLRRTKNMKDVDGKPLVSLPPKEVIVEKLQLSSSEKRVYQSMLEDAENSVKE
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Known secondary structure (DSSP) TT
TTT
TT
B
SSS
BSS


S


 .........500.........510.........520.........530.........540.........550.........560
Sequence GLAKGDLLKNYTNILVHILRLRQVCCHLDLLKPKSSISQDKLDALSANFRDIHSASEQLPSFECAICTTE
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Known secondary structure (DSSP) TT
GGGG
GGG







S


SS





TTT

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence CIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVLKLKEPIDAERGYELISFHS
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Known secondary structure (DSSP) S
SSGGG
TTS
TTT




TTT




GGG

SS
BTTTB

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence HFQSTKIKALLRHLKQIQETSPGEQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDMKERTRIL
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Known secondary structure (DSSP)



STT
S
S
TTT

SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence EQFHDKDLSCIKLLLLSLKTGGVGLNLTCASRAFMMDPWWSPGMEDQAIDRIHRIGQQQTVKVVRFIIDN
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Known secondary structure (DSSP) S

TTSTTTTTTT


TT
S

S
TT

SS
SS
TT
 .........780.........790.........800.........810
Sequence SVEEKMLRIQERKRMLGDIVEGDEAERRQKRIEEIQMLFQ
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Known secondary structure (DSSP) S
S



SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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