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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6l4cC_

Fold library idPDB HeaderMoleculeTitle
c6l4cC_3.19PDB header: plant proteinChain: C: PDB Molecule: 48-kda glycoprotein;


Added to library: Sat Dec 7 08:25:52 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPYVFQDEHFESRVKTEEGRVQVLENFTKRSRLLSGIENFRLAILEANPHTFISPAHFDAELVLFVAKGR
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Known secondary structure (DSSP)
TT
GGG
SS


GGG
TTTT

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATITMVREEKRESFNVEHGDIIRIPAGTPVYMINRDENEKLFIVKILQPVSAPGHFEAFYGAGGEDPESF
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Known secondary structure (DSSP)
SS

TT
TT



SSS
SSSTT



S
SSSS

G
 .........150.........160.........170.........180.........190.........200.........210
Sequence YRAFSWEVLEAALKVRREQLEKVFGEQSKGSIVKASREKIRALSSGPINLLHKHPSQSNQFGRLYEAHPD
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Known secondary structure (DSSP) GGGS
T

T


S
S





SSSS

STT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DHKQLQDLDLMVSFANITKGSMAGPYYNSRATKISVVVEGEGFFEMACPHLSSSQKISARLRRGVVFVAP
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Known secondary structure (DSSP) T
TTT
TTSS


TTSS





TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence AGHPVAVIASQNNNLQVLCFEVNAHGNSRFPLAGKGNIVNEFERDAKELAFNLPSREVERIFKNQDQAFF
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Known secondary structure (DSSP) TT


SSS
S
TT

SSSTT
SSTTS
TS
S

S
S
 ...
Sequence FPG
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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