Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6l3nD_

Fold library idPDB HeaderMoleculeTitle
c6l3nD_1.83PDB header: transferaseChain: D: PDB Molecule: polyketide synthase;


Added to library: Sat Dec 21 09:00:47 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPVPVPVAVSGATTAGLRAQAARLAGHLRERPALGPEAVARPLLLSRAQRERRAVVVAADRDSLLTGLDA
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)



SST
TT

SS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAGGEAGPRLASGAADVTGRVVLVFPGQGAHWTGVAERLWREAPVFADSMARCADVLRDLAGWELREVLV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TT


TT



S

SS


TTTT

S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DPVALERVDVLQPVSFAVVVSLAALWASVGVRPDAVVGHSQGEVAAAHVAGALTLAEAARIVVLRSALIA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
TTGGGSTT


S
TTTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RELSGRGAMLTVVADVERVTALLAGFEGRVCVAAVNGPASVTVSGEDGAVREFERVLSARRMLRWRLPGV
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTTS
SS
TTT
TTTTT
TT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DFAGHSPQVDALRAELLAALGDIASREPEIPLLSTVTGEPATRLDAEHWYRNLREPVRFADAVTALLDRG
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
S
TTSGGGGGG
S





SS
TTTSSB



SS
B
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HRVFVEVSPHPVLTTSVVDLAAPHRTAVVGTLRRDEGGLDRFLLSAAELHVRGVPVDLARHAGAGTAEVP
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
SSS
SSTTS


S
BTTB
STTT



GGGGS
S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D