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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6l07B_

Fold library idPDB HeaderMoleculeTitle
c6l07B_3.60PDB header: lyaseChain: B: PDB Molecule: phosphatidylserine decarboxylase beta chain;


Added to library: Sat Apr 18 08:48:45 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPMLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASYRTFNEFFV
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Known secondary structure (DSSP)
TTTS
S

ST

GGGBS


GGG
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence RPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYL
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Known secondary structure (DSSP)

B
TTTS




TTS



SSS

SSTTTTT
TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence SPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGS
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Known secondary structure (DSSP)
TTS


SS


B



STTGGGTSTTB
TT

SS

 .........220.........230.........240.........250.....
Sequence IETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLG
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Known secondary structure (DSSP) TTTSS

SS



SSSTT


TT



Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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