PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6kzwC_

Fold library id	PDB Header	Molecule	Title
c6kzwC_	2.08	PDB header: protein binding	Chain: C: PDB Molecule: pyridoxal phosphate homeostasis protein;

Links to external resources
Added to library: Sat Oct 19 08:27:05 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X S I K A N V E E I L E D I K K Y S P Y P E K V K L V A V T K Y S S V E D I E K F L E T G Q N I C G E N K V Q V I K D K I E Y F K E K N K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
T T
T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I K W H F I G N L Q K N K V K Y I I D D V D L I H S V N K L S L A Q E I N K K A E Q S S K I X D V L L E I N V Y G E E S K Q G Y S L D E L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G G G G T T T T
S
S T T
B
S
S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C D I I E L Q N L K N L N I I G V X T X A P F T D D E K I L R X V F S E L R K I K D E L N K E Y F N N N L T E L S X G X S S D Y K I A L Q E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S
T S T T
T T T T

. . . . . . . . . 220 . . .

Sequence G S T F I R V G T K I F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	S	I	K	A	N	V	E	E	I	L	E	D	I	K	K	Y	S	P	Y	P	E	K	V	K	L	V	A	V	T	K	Y	S	S	V	E	D	I	E	K	F	L	E	T	G	Q	N	I	C	G	E	N	K	V	Q	V	I	K	D	K	I	E	Y	F	K	E	K	N	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S	G	G	G								T	T											T	T	T																						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	K	W	H	F	I	G	N	L	Q	K	N	K	V	K	Y	I	I	D	D	V	D	L	I	H	S	V	N	K	L	S	L	A	Q	E	I	N	K	K	A	E	Q	S	S	K	I	X	D	V	L	L	E	I	N	V	Y	G	E	E	S	K	Q	G	Y	S	L	D	E	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S				G	G	G	G	G	G	T	T	T	T		S							S														T	T									B			S			S	S				B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	D	I	I	E	L	Q	N	L	K	N	L	N	I	I	G	V	X	T	X	A	P	F	T	D	D	E	K	I	L	R	X	V	F	S	E	L	R	K	I	K	D	E	L	N	K	E	Y	F	N	N	N	L	T	E	L	S	X	G	X	S	S	D	Y	K	I	A	L	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		T	T														S																							T	S	T	T										T	T	T							T
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	G	S	T	F	I	R	V	G	T	K	I	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S					S