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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kzpA_

Fold library idPDB HeaderMoleculeTitle
c6kzpA_3.10PDB header: membrane proteinChain: A: PDB Molecule: voltage-dependent t-type calcium channel subunit alpha-1g,


Added to library: Sat Dec 21 08:51:06 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPWFERISMLVILLNCVTLGMFRPCEDIACDSQRCRILQAFDDFIFAFFAVEMVVKMVAGDTWNRLDFFI
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Known secondary structure (DSSP)
T

TTTTTSS
ST



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIAGMLEYSLDLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVG
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Known secondary structure (DSSP) SS


SSSGGGGGGGGGGSGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQLWAGLLRNRCFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMRSCRSVPTLRCVNWNQYYTN
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Known secondary structure (DSSP) TTSSS

TT



TTS


SB


SSTTTS





SSS

S

GGG







GGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence CSAGEHNPFKGAINFDNIGYAWIAIFQVITLEGWVDIMYFVMDAHSFYNFIYFILLIIVGSFFMINLCLV
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Known secondary structure (DSSP)
S

TS

SSTTSST
GGGTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIATQFSETKQREIVDSKYFGRGIMIAILVNTLSMGIEYHEQPEELTNALEISNIVFTSLFALEMLLKLL
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Known secondary structure (DSSP)

TTSST


TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VYGPFGYIKNPYNIFDGVIVVISVWEIVSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLL
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Known secondary structure (DSSP) SS
TTS

GGGGGGGGGSTT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence MLFIFIFSILGMHLFGCKFASLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSSWAALYFIALM
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Known secondary structure (DSSP) TTT
S




SS
SSSTTTSST
GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence TFGNYVLFNLLVAILVEGFQFRLLCHRIITHKMFDHVVLVIIFLNCITIAMERPKIDPHSAERIFLTLSN
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Known secondary structure (DSSP) TT


T

TT

SSSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence YIFTAVFLAEMTVKVVALGSSWNVLDGLLVLISVIDILVSMVSKILGMLRVLRLLRTLRPLRVISRAQGL
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Known secondary structure (DSSP) T



TTGGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence KLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFFVCQGEDTRNITNKSDCAEASYRWVRHKYN
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Known secondary structure (DSSP) TSTTTT


SS
SS

BT

SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence FDNLGQALMSLFVLASKDGWVDIMYDGLDAVGVDQQPIMNHNPWMLLYFISFLLIVAFFVLNMFVGVVVE
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Known secondary structure (DSSP)
SST
TT


SSB


TTS
GGG
 .........780.........790.........800.........810.........820.........830.........840
Sequence NFHYLDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVLESVFKLVAFGFRRFFQDRWNQL
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Known secondary structure (DSSP)

T

TT


SSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence DLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGL
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Known secondary structure (DSSP) TTTSS


GGGGGGGGTTT
T
 .........920.........930.........940.........950.........960.........970.........980
Sequence LFMLLFFIFAALGVELFGDLECDETHPCEGLGRHATFRNFGMAFLTLFRVSTGDNWNGIMKDTLRDYNTV
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Known secondary structure (DSSP) SS



SSS

SS
SSS


SSTTSST


 .........990.........1000.........1010....
Sequence ISPIYFVSFVLTAQFVLVNVVIAVLMKHLEESNK
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Known secondary structure (DSSP) TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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