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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kybD_

Fold library idPDB HeaderMoleculeTitle
c6kybD_2.80PDB header: lipid binding protein,transport proteinChain: D: PDB Molecule: autophagy-related protein 18;


Added to library: Sat Sep 12 09:34:35 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSDSSPTINFINFNQTGTCISLGTSKGFKIFNCEPFGKFYSEDSGGYAIVEMLFSTSLLALVGIGDRRLR
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B
SSS

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TTTT
S



S

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S

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 .........80.........90.........100.........110.........120.........130.........140
Sequence IINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMSPSVANS
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SSS


S




SS





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S

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S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLVYPSNGDVIVFNLETLQPTMVIEAHKGEIAAMAISFDGTLMATASDKGTIIRVFDIETGDKIYQFRRG
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BTTTT


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 .........220.........230.........240.........250.........260.........270.........280
Sequence TYATRIYSISFSEDSQYLAVTGSSKTVHIFKLESSRHFASLKLPVETNVMTISSIGSPIDIDTSEYPELK
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SS


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S

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B


S
SSS


 .........290.........300.........310.......
Sequence MVPIRVVSSDGYLYNFVMDPERGGDCLILSQYSILMD
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Known secondary structure (DSSP) BTTS
TT


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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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