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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6krdE_

Fold library idPDB HeaderMoleculeTitle
c6krdE_4.38PDB header: chaperoneChain: E: PDB Molecule: t-complex protein 1 subunit epsilon;


Added to library: Sat Sep 21 08:27:01 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSK
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Known secondary structure (DSSP)


SSSTTSGGG
STT



TTS
S
T




TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDF
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Known secondary structure (DSSP) TSSTTTT


STTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDF
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Known secondary structure (DSSP) TTTSGGGGTT

TTT



STTBS
STT


BSS






 .........220.........230.........240.........250.........260.........270.........280
Sequence SHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRW
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Known secondary structure (DSSP) SSTTS
SB


TTT
SS


S








T

SS


TTGGGTT



 .........290.........300.........310.........320.........330.........340.........350
Sequence VGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMI
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Known secondary structure (DSSP)

TTTTS




S
SSS

SSSS


S



TT
TT



SS

S
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAE
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Known secondary structure (DSSP)

B

TTTTS
STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVI
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Known secondary structure (DSSP) TTS
TTTT







SS

S
S
TTTTT

B
T




 .....
Sequence ISGKD
Predicted secondary structure




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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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