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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kqtA_

Fold library idPDB HeaderMoleculeTitle
c6kqtA_2.00PDB header: hydrolaseChain: A: PDB Molecule: lacto-n-biosidase;


Added to library: Sat Jun 13 08:30:24 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NQQEIYAAYRVANLLGVYEDCSPNGFYQRWKQKNAFMKAQAEEFGIGSTDHFIDDVERIVDQRRAETEWK
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Known secondary structure (DSSP)
TSSS

SS

TT
S
GGGTGGGT

S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NADAWKNGTAAFGARYLTPEMYLDYELKSIQLAFATYKGELVGNHKCHVYTEDEKRAFYDANQDLFTRYH
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Known secondary structure (DSSP) TTT



S
SS




STT





GGGSB
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDLFSYEEVDLIIEKWLKVQEYQDIIESVVANTDNAVRWITEFEKIWNQMQEEKRLRGHCYYVSSIHGDD
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Known secondary structure (DSSP) S
B

T





TTT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANDGTEDQPLKSLYAVNRLDLQPGDQVLLERGSVFENQFLHLNVQGTKEQPIYIGAYGNGAKPLIQTNGQ
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Known secondary structure (DSSP) TS


SSS
B





TT
TT
T



B

SSS
SSSS


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GIWYQDYGNELDAPTHVYRGYVSSAVLLYDCEYLTVENLEISNKGGVFGETYSAPHKMNRTGVAGIAKNR
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Known secondary structure (DSSP)

SS

SSTTS

S
BSS




TT

TT
TT

SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GTLHEIHLSNLYIHDVEGNVYDKHMNNGGIYFTCLKPEAEEKTGVARYENVSVRGCHLKRTSRWGIAVGY
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Known secondary structure (DSSP) SS


SS
SSSS



TT


S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence SYKCKEFMTAELPDELFERYGHHNIYIADNYVEEIGGDGITVMYAMKPLVEYNSGDSCALEMNDRYYTEP
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Known secondary structure (DSSP) GGGGGG
SSS


BS
S
SS
SSBBS
S
S

TT
STTT



 .........500.........510.........520.........530.........540.........550.........560
Sequence EDRAGKVAAGIWPWKCKDALLTYNEMRDMRLNQDSMAWDADSGDGTLYQYNYSHLNEGGCVMFCLEEAIH
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Known secondary structure (DSSP) TT






SS
BS
S




SSS

S
SS
S
S
TT
SSTTS
 .........570.........580.........590.........600.........610.........
Sequence NEFRYNVSVDDLGGLISPSGNPDAWIHHNVFYRRAEVPFVRPHMDDGKYVAEENEIHLI
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Known secondary structure (DSSP)
S
S

S
SS
S

S

TTS
SB
TTS

S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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