PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6kldA_

Fold library id	PDB Header	Molecule	Title
c6kldA_	3.58	PDB header: viral protein	Chain: A: PDB Molecule: rna-directed rna polymerase l;

Links to external resources
Added to library: Sat Mar 21 08:45:11 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D E Y V Q E L K G L I R K H I P E R C E F G H Q K V T F L S Q V H P S P L L T E G F K L L S S L V E L E S C E A H A C Q A N T D Q R F V D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
S T
T T T
B
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I L S D N G I L C P T L P K V I P D G F K L T G K T L I L L E T F V R V N P D E F E K K W K A D M S K L L N L K H D L Q K S G V T L V P I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
S S G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D G R S N Y N N R F V A D W V I E R I R W L L I E I L K A S K S E D Q E Y Q R L I H S L S N V K L E N L E H L K R N S L D Y D E R L N E S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S
S S S
T
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence F I G L K G D I R E S T V R E E L I K L K L W F K D E V F S K G L G K F K L T D R R E L L E S L S S L G A H L D S D V S S C P F C N N K L M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S S T T T T S
S
S S
S S S
S
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence E I V Y N V T F S C V E R S N I E K H Y L S V L S L C N K I K G L K V F N T R R N T L L F L D L I M V N L M V D I S D S C Q D A I E S L R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S T T S S S T T T T T T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence S G L I V G Q M V M L V N D R V L D I L E A V K L I R K K I G T N P N W V K N C S K I L E R S H P E I W H H L S T L I K Q P D F N S L I S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B T T B
T T T
T T S S S S S S S S S T T
T T T T T S T T T T T S
S
S S
T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence A Q H L V S D R P I M R Y S K I C R H K L F Q E M S S F E Q M R L F K T L S S I S L S L I N S M K T S F S S R L L V N E F G N V R L R E C Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B
G G G S
S S T
S
S S
S S
B
S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence A Q R F Y L A E S L V G F L F Y Q K T G E R S R C Y S V Y L S D N G V M S E Q G S F Y C D P K R F F L P V F S D E V L A G M C E E M T S W L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S S
S S S
G G G
S T T T
S S T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence D F D T G L M N D T G P I L R L L V L A I L C S P S K R N Q T F L Q G L R Y F L M A F A N Q I H H I D L T S K L V V E C K S S S E V V V Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T S S
S S S T T G G G S S
T T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence L A V G L F I R L L S G E S D A S L F F S R R F K Y L L N V S Y L C H L I T K E T P D R L T D Q I K C F E K F I E P K V K F G C A V V N P S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
S S
T T S
S
S
T T
B

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence L N G K L T V D Q E D I M I N G L K K F F S K S L R D T E D V Q T P G V C K E L L N Y C V S L F N R G K L K V S G E L K N N P F R V V I P K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T
T T S S
S S S S
T T T T T S S S
S
S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence L D E L G N I L S T Y D K E K L V S A C V S S M A E R F K T Y N L D P D S T D Y L I L K N L T G L T Q E E L S L M Y E A L T E E Q V E S F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
S S
T T
S S S
T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence E I K H D V Q V A L A K M A D N S P F G V M K E I R A E V S L H E V K D F D P D V L P P E V Y K E L C D A V Y K S S E K C N F F L E G V L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S T T S S S S S S G G G
S S S S
T T
S T T S
S S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence V C P L G L L L K N L T T S S Y V D E E Y F M C F K Y L L I Q G H F D Q F T N A A L R N L C F Y S E D S P T E F T S I S S N S G N L K F G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S
T T T T
S S G G G G S S
T T S
S S
S S
B

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence S Y K E Q V G S N R E L Y V G D L N T K L M T R L V E D F S E A V G N S M K Y T C L N S E K E F E R A I C D M K M A V N N G D L S C S Y D H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S B
S S
T
B

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence S K W G P T M S P A L F L A L L Q M L E L R T P V D R S K I D L D S V K S I L K W H L H K V V E V P I N V A E A Y C I G E E F F H Q T M Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T T
T
T T T
S
T
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence N G Q I P S H I M S V L D M G Q G I L H N T S D L Y G L I T E Q F L C Y A L D L L Y D V I P V S Y T S S D D Q I T L I K T P S E W L E M I C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S S
T T T S
S S
T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence F H E F L S S K L N K F V S P K S V I G T F V A E F K S R F F V M G E E T P L L T K F V A A A L H N V K C K T P T Q L S E T I D T I C D Q C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
T T
S S T T T T
S
S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence I A N G V S T K I V T R I S K R V N Q L I R Y S G Y G E T P F G A I E D Q D V K D W V D G S R G Y R L Q R K I E A I F H D D K E T S F I R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T S
S S
S S
S S
S T T T T
S S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence C A R K V F N D I K R G R I F E E N L I N L I G R G G D E A L T G F L Q Y A G C S E Q E V N R V L N Y R W V N L S S F G D L R L V L R T K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
S
T T
S S
T T
B
T T S S S
S
S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence M T V P T L I K T L Q S K L S R F Q S S V A S G F I G F C K S M G S K C V R D G G F L Y I K E V Y S G V S A C T C E I C A L K P K I I Y C N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S T T S S
T
S S T T S S T T T S B
S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence N S L N K V S Q F S K P I L W D Y F S L V L T N A C E L G E W V F S T V K E P Q Q N F F W A V K P K G M N H V L Q S I R R N Y P V L F D E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S S S
T T
S
S G G G S
B
S S S

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . .

Sequence L L K F L D V C I A L D M M N E N L G I I S H L L K T R D N S V Y I V K Q S D C A L A H I R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S S
S S
S T T T S S
S
T
B

Download: PDB structure FASTA sequence
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	E	Y	V	Q	E	L	K	G	L	I	R	K	H	I	P	E	R	C	E	F	G	H	Q	K	V	T	F	L	S	Q	V	H	P	S	P	L	L	T	E	G	F	K	L	L	S	S	L	V	E	L	E	S	C	E	A	H	A	C	Q	A	N	T	D	Q	R	F	V	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								T	T	S					S												T																										T	T	T			B		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	S	D	N	G	I	L	C	P	T	L	P	K	V	I	P	D	G	F	K	L	T	G	K	T	L	I	L	L	E	T	F	V	R	V	N	P	D	E	F	E	K	K	W	K	A	D	M	S	K	L	L	N	L	K	H	D	L	Q	K	S	G	V	T	L	V	P	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												S						T	T											S	S																							G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	G	R	S	N	Y	N	N	R	F	V	A	D	W	V	I	E	R	I	R	W	L	L	I	E	I	L	K	A	S	K	S	E	D	Q	E	Y	Q	R	L	I	H	S	L	S	N	V	K	L	E	N	L	E	H	L	K	R	N	S	L	D	Y	D	E	R	L	N	E	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				S	S	S		S	S																S														T										S							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	I	G	L	K	G	D	I	R	E	S	T	V	R	E	E	L	I	K	L	K	L	W	F	K	D	E	V	F	S	K	G	L	G	K	F	K	L	T	D	R	R	E	L	L	E	S	L	S	S	L	G	A	H	L	D	S	D	V	S	S	C	P	F	C	N	N	K	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T							S	S																	T	T	T	T	S			S																	S	S		S	S	S				S						S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	I	V	Y	N	V	T	F	S	C	V	E	R	S	N	I	E	K	H	Y	L	S	V	L	S	L	C	N	K	I	K	G	L	K	V	F	N	T	R	R	N	T	L	L	F	L	D	L	I	M	V	N	L	M	V	D	I	S	D	S	C	Q	D	A	I	E	S	L	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																									S	S		S																			T	T	S	S	S	T	T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	G	L	I	V	G	Q	M	V	M	L	V	N	D	R	V	L	D	I	L	E	A	V	K	L	I	R	K	K	I	G	T	N	P	N	W	V	K	N	C	S	K	I	L	E	R	S	H	P	E	I	W	H	H	L	S	T	L	I	K	Q	P	D	F	N	S	L	I	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		B	T	T	B				T	T	T				T	T	S	S	S						S	S	S	S	S	S	T	T		T	T	T	T	T	S	T	T	T	T	T	S					S		S					S				T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	Q	H	L	V	S	D	R	P	I	M	R	Y	S	K	I	C	R	H	K	L	F	Q	E	M	S	S	F	E	Q	M	R	L	F	K	T	L	S	S	I	S	L	S	L	I	N	S	M	K	T	S	F	S	S	R	L	L	V	N	E	F	G	N	V	R	L	R	E	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S								B										G	G	G	S		S	S																				T		S		S	S				S	S					B				S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	Q	R	F	Y	L	A	E	S	L	V	G	F	L	F	Y	Q	K	T	G	E	R	S	R	C	Y	S	V	Y	L	S	D	N	G	V	M	S	E	Q	G	S	F	Y	C	D	P	K	R	F	F	L	P	V	F	S	D	E	V	L	A	G	M	C	E	E	M	T	S	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S											S	S	S										S	S	S												G	G	G			S	T	T	T		S	S												T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	F	D	T	G	L	M	N	D	T	G	P	I	L	R	L	L	V	L	A	I	L	C	S	P	S	K	R	N	Q	T	F	L	Q	G	L	R	Y	F	L	M	A	F	A	N	Q	I	H	H	I	D	L	T	S	K	L	V	V	E	C	K	S	S	S	E	V	V	V	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T	S																		S			S																		S	S				T	T	G	G	G	S	S						T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	A	V	G	L	F	I	R	L	L	S	G	E	S	D	A	S	L	F	F	S	R	R	F	K	Y	L	L	N	V	S	Y	L	C	H	L	I	T	K	E	T	P	D	R	L	T	D	Q	I	K	C	F	E	K	F	I	E	P	K	V	K	F	G	C	A	V	V	N	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		S	S		S	S																	T	T	S			S		S																				T	T			B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	N	G	K	L	T	V	D	Q	E	D	I	M	I	N	G	L	K	K	F	F	S	K	S	L	R	D	T	E	D	V	Q	T	P	G	V	C	K	E	L	L	N	Y	C	V	S	L	F	N	R	G	K	L	K	V	S	G	E	L	K	N	N	P	F	R	V	V	I	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																		T				T	T	S	S		S	S	S	S					T	T											T	T	T	S	S	S						S		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	D	E	L	G	N	I	L	S	T	Y	D	K	E	K	L	V	S	A	C	V	S	S	M	A	E	R	F	K	T	Y	N	L	D	P	D	S	T	D	Y	L	I	L	K	N	L	T	G	L	T	Q	E	E	L	S	L	M	Y	E	A	L	T	E	E	Q	V	E	S	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S		S	S																				T	T						S	S											S												T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	E	I	K	H	D	V	Q	V	A	L	A	K	M	A	D	N	S	P	F	G	V	M	K	E	I	R	A	E	V	S	L	H	E	V	K	D	F	D	P	D	V	L	P	P	E	V	Y	K	E	L	C	D	A	V	Y	K	S	S	E	K	C	N	F	F	L	E	G	V	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T								S	S		S	T	T						S	S	S	S	S	S	G	G	G			S	S	S	S									T	T				S	T	T	S		S	S			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	V	C	P	L	G	L	L	L	K	N	L	T	T	S	S	Y	V	D	E	E	Y	F	M	C	F	K	Y	L	L	I	Q	G	H	F	D	Q	F	T	N	A	A	L	R	N	L	C	F	Y	S	E	D	S	P	T	E	F	T	S	I	S	S	N	S	G	N	L	K	F	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T													S	S													T	T	T	T					S	S	G	G	G	G	S	S			T	T	S						S	S			S	S				B
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	S	Y	K	E	Q	V	G	S	N	R	E	L	Y	V	G	D	L	N	T	K	L	M	T	R	L	V	E	D	F	S	E	A	V	G	N	S	M	K	Y	T	C	L	N	S	E	K	E	F	E	R	A	I	C	D	M	K	M	A	V	N	N	G	D	L	S	C	S	Y	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S																														S	S	B		S	S																			T								B
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	S	K	W	G	P	T	M	S	P	A	L	F	L	A	L	L	Q	M	L	E	L	R	T	P	V	D	R	S	K	I	D	L	D	S	V	K	S	I	L	K	W	H	L	H	K	V	V	E	V	P	I	N	V	A	E	A	Y	C	I	G	E	E	F	F	H	Q	T	M	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	T	T	T												T						T	T	T		S																T																										S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	N	G	Q	I	P	S	H	I	M	S	V	L	D	M	G	Q	G	I	L	H	N	T	S	D	L	Y	G	L	I	T	E	Q	F	L	C	Y	A	L	D	L	L	Y	D	V	I	P	V	S	Y	T	S	S	D	D	Q	I	T	L	I	K	T	P	S	E	W	L	E	M	I	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								S	S				T	T	T	S																																	S	S												T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	F	H	E	F	L	S	S	K	L	N	K	F	V	S	P	K	S	V	I	G	T	F	V	A	E	F	K	S	R	F	F	V	M	G	E	E	T	P	L	L	T	K	F	V	A	A	A	L	H	N	V	K	C	K	T	P	T	Q	L	S	E	T	I	D	T	I	C	D	Q	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			B		T	T					S	S					T	T					T	T															S					S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	I	A	N	G	V	S	T	K	I	V	T	R	I	S	K	R	V	N	Q	L	I	R	Y	S	G	Y	G	E	T	P	F	G	A	I	E	D	Q	D	V	K	D	W	V	D	G	S	R	G	Y	R	L	Q	R	K	I	E	A	I	F	H	D	D	K	E	T	S	F	I	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T				S																	T	T	S				S	S		S	S		S	S			S	T	T	T	T																S	S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	C	A	R	K	V	F	N	D	I	K	R	G	R	I	F	E	E	N	L	I	N	L	I	G	R	G	G	D	E	A	L	T	G	F	L	Q	Y	A	G	C	S	E	Q	E	V	N	R	V	L	N	Y	R	W	V	N	L	S	S	F	G	D	L	R	L	V	L	R	T	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	T	T			S		T	T									S												S										T	T		B				T	T	S	S	S							S			S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	M	T	V	P	T	L	I	K	T	L	Q	S	K	L	S	R	F	Q	S	S	V	A	S	G	F	I	G	F	C	K	S	M	G	S	K	C	V	R	D	G	G	F	L	Y	I	K	E	V	Y	S	G	V	S	A	C	T	C	E	I	C	A	L	K	P	K	I	I	Y	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																S											T	T	S	S																T							S	S	T	T	S	S	T	T	T	S	B		S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	N	S	L	N	K	V	S	Q	F	S	K	P	I	L	W	D	Y	F	S	L	V	L	T	N	A	C	E	L	G	E	W	V	F	S	T	V	K	E	P	Q	Q	N	F	F	W	A	V	K	P	K	G	M	N	H	V	L	Q	S	I	R	R	N	Y	P	V	L	F	D	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S	S	S		T	T																			S		S	G	G	G	S			B																										S					S	S
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.
Sequence	L	L	K	F	L	D	V	C	I	A	L	D	M	M	N	E	N	L	G	I	I	S	H	L	L	K	T	R	D	N	S	V	Y	I	V	K	Q	S	D	C	A	L	A	H	I	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S							T	T	S	S		S	S				S	T	T	T	S	S			S													T			B