Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kiuN_

Fold library idPDB HeaderMoleculeTitle
c6kiuN_3.20PDB header: transcription/dnaChain: N: PDB Molecule: retinoblastoma-binding protein 5;


Added to library: Sat Sep 14 08:57:25 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHK
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

S

S



SSS
B



SSS
BTTSSSSSS

SS

SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDD
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) TT






SSS








SS


B
SS
SS
BSSS


SSSS



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADR
Predicted secondary structure





























































SS confidence





































































Known secondary structure (DSSP) SS



SSSS
TTSTTT






SSS




SSSS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKIL
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
TT
TT




S

SS



SSS
SSS

SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence HGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFEDEEVDVT
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)


TT






TTS


TT







SSSS
TT



SS




S
SS







SS
 ..
Sequence SV
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D