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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kiiA_

Fold library idPDB HeaderMoleculeTitle
c6kiiA_1.60PDB header: dna binding protein, lyaseChain: A: PDB Molecule: deoxyribopyrimidine photolyase;


Added to library: Sat Jul 25 08:36:01 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKIILWYRNDLRLHDHEPLDLATSTQGQIIPLYCFDPRQFAKTSFGFPKTGGFRGKFLLESVADLRHNFQ
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Known secondary structure (DSSP)
SS


STT
T

GGGGSB
TTS
BSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KIGSNLLVRIGEPERVIFDLVKQLNIDAVYYHKEVTAEELAVETALEKALTPLGVEVKSFWGATLYHLKE
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Known secondary structure (DSSP) TT


S
T




SGGGT


SSSS
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LPFPIEKLPELFTNFRKQVEQKSVIYPPYTPPNQLPQFPDIEPGEIPTLTELGITPAPFDERSVLDFAGG
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Known secondary structure (DSSP) SSS
GGG

SS









S





SS






T






TTSSS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ETAGLSRLNDYFWRRDCLKNYKQTRNGMLGSDYSSKFSPWLANGCLSPRWIYQQVQDYQHQRVKNDSTYW
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Known secondary structure (DSSP) TTS

GGGTT

SSSTTS


TTSS
T

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LVFELLWRDYFRFICLKHGPKVFYKSGLQGVKIPWGENWEQWQIWCQGLTGFPLVDANMRELAATGFMSN
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Known secondary structure (DSSP) GGGGGSTTTTTT




B

TT
SS
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence RGRQNVASFLTKNLGINWQMGAEWFESVLIDYDVCSNWGNWNYTAGVGNDGRGFRYFNIAKQSQDYDPMG
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Known secondary structure (DSSP) TS
B

TT

T
S

S

S




TTS
 .........430.........440.........450.........460.........470.........480.....
Sequence DYVKHWLPELASIPDGRVHSPWRLSNQEQIRFGVRLGVDYPYPMVDLQESVEANRRIYEKALRMT
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Known secondary structure (DSSP)
GGGTTS
TTGGG
GGG

T

BTTTB


SS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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