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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ki3B_

Fold library idPDB HeaderMoleculeTitle
c6ki3B_2.35PDB header: dna binding protein/dnaChain: B: PDB Molecule: probable ap endonuclease;


Added to library: Sat May 30 08:24:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGGGMFGAFVSHRLWSDSGCTTTCITNSIANYVAFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLK
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Known secondary structure (DSSP)





S
TT
TT
TT


S
SB
SSSS
B


 .........80.........90.........100.........110.........120.........130.........140
Sequence MIVKHNLWVVAHGTYLDVPWSRRSAFVTHFIQQELLICKEVGIKGLVLHLGAVEPELIVEGLKKIKPVEG
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Known secondary structure (DSSP) T


TT

TTSSST



SS
TS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVNISSYNDAGQWLRSLENI
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Known secondary structure (DSSP)



S

SS

TTSTT

STT



BTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence HSVIPPSHIMFHLNDAATECGSGIDRHASLFEGMIWKSYSHKIKQSGLYCFVEYITRHQCPAILERNLGS
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Known secondary structure (DSSP) TTTS
GGG

SS
TT





TTSSTTTGGGSSSGGGBT




SS
 .........290.........300
Sequence SMQLQTALTAEFTTLKSLLK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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